RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 ZBTB18Q99592 522 aa12.6□□□□□ -0.39
COMMD3-208ENST00000470045 INPP5KQ9BT40 448 aa12.6□□□□□ -0.39
COMMD3-208ENST00000470045 LAT2Q9GZY6 243 aa12.6□□□□□ -0.39
COMMD3-208ENST00000470045 CLEC4MQ9H2X3 399 aaPredicted RBP12.6□□□□□ -0.39
COMMD3-208ENST00000470045 TMEM185BQ9H7F4 350 aa12.6□□□□□ -0.39
COMMD3-208ENST00000470045 ZIM2Q9NZV7 527 aa12.6□□□□□ -0.39
COMMD3-208ENST00000470045 WDR45Q9Y484 360 aa12.6□□□□□ -0.39
COMMD3-208ENST00000470045 SH3D21A4FU49 640 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 SLC22A3O75751 556 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 SMNDC1O75940 238 aaKnown RBP eCLIP12.59□□□□□ -0.39
COMMD3-208ENST00000470045 CSTAP01040 98 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 OPN1LWP04000 364 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 IL6P05231 212 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 DNAJA1P31689 397 aaKnown RBP12.59□□□□□ -0.39
COMMD3-208ENST00000470045 CHI3L1P36222 383 aaPredicted RBP12.59□□□□□ -0.39
COMMD3-208ENST00000470045 CPOXP36551 454 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 PGM1P36871 562 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 CD79BP40259 229 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 MRPL19P49406 292 aaKnown RBP12.59□□□□□ -0.39
COMMD3-208ENST00000470045 PLAURQ03405 335 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 CBFBQ13951 182 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 QPRTQ15274 297 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 MAPK14Q16539 360 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 ZNF239Q16600 458 aaKnown RBP12.59□□□□□ -0.39
COMMD3-208ENST00000470045 PDSS1Q5T2R2 415 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 HBMQ6B0K9 141 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 NXNQ6DKJ4 435 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 EPGNQ6UW88 154 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 MSANTD1Q6ZTZ1 278 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 RNF130Q86XS8 419 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 ZNF619Q8N2I2 560 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 TRIML2Q8N7C3 387 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 OR6K3Q8NGY3 331 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 NRGNQ92686 78 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 MARK4Q96L34 752 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 OPN3Q9H1Y3 402 aaPredicted RBP12.59□□□□□ -0.39
COMMD3-208ENST00000470045 COQ10BQ9H8M1 238 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 GLRX2Q9NS18 164 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 ELOVL5Q9NYP7 299 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 MCTS1Q9ULC4 181 aaKnown RBP12.59□□□□□ -0.39
COMMD3-208ENST00000470045 TESMINQ9Y4I5 508 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 USH1CQ9Y6N9 552 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 F8P00451 2351 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 ABCA4P78363 2273 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 AKAP6Q13023 2319 aa12.59□□□□□ -0.39
COMMD3-208ENST00000470045 HIVEP1P15822 2718 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 SYNGR4O95473 234 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 ZCCHC18P0CG32 403 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 SFTPDP35247 375 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 MAGEA8P43361 318 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 MVDP53602 400 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 FAM27E3Q08E93 113 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 SELENBP1Q13228 472 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 SPNS3Q6ZMD2 512 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 EIF3MQ7L2H7 374 aaKnown RBP12.58□□□□□ -0.4
COMMD3-208ENST00000470045 CDC20BQ86Y33 519 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 TMCO5AQ8N6Q1 288 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 RNF128Q8TEB7 428 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 ZFP90Q8TF47 636 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 ST8SIA1Q92185 356 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 OSTF1Q92882 214 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 NINJ1Q92982 152 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 CPNE4Q96A23 557 aaPredicted RBP12.58□□□□□ -0.4
COMMD3-208ENST00000470045 TRNT1Q96Q11 434 aaKnown RBP12.58□□□□□ -0.4
COMMD3-208ENST00000470045 SRXN1Q9BYN0 137 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 PRRG4Q9BZD6 226 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 SLC38A1Q9H2H9 487 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 PLSCR4Q9NRQ2 329 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 SLC6A13Q9NSD5 602 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 LIPT1Q9Y234 373 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 SLC35A3Q9Y2D2 325 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 EMC9Q9Y3B6 208 aa12.58□□□□□ -0.4
COMMD3-208ENST00000470045 GJE1A6NN92 205 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 RFXANKO14593 260 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 UBDO15205 165 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 DIAPH2O60879 1101 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 BCAS1O75363 584 aaPredicted RBP12.57□□□□□ -0.4
COMMD3-208ENST00000470045 TGDSO95455 350 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 H6PDO95479 791 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 HRGP04196 525 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 GSNP06396 782 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 UBTFL6P0CB48 400 aaPredicted RBP12.57□□□□□ -0.4
COMMD3-208ENST00000470045 H2AFXP16104 143 aaPredicted RBP12.57□□□□□ -0.4
COMMD3-208ENST00000470045 RPS4Y1P22090 263 aaKnown RBP12.57□□□□□ -0.4
COMMD3-208ENST00000470045 UGT2B10P36537 528 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 ANXA11P50995 505 aaKnown RBP12.57□□□□□ -0.4
COMMD3-208ENST00000470045 CCR4P51679 360 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 CARD18P57730 90 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 CHRNEQ04844 493 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 COX20Q5RI15 118 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 C3orf33Q6P1S2 294 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 ZNF621Q6ZSS3 439 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 ANKFN1Q8N957 763 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 ZNF610Q8N9Z0 462 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 OR9I1Q8NGQ6 314 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 RFWD2Q8NHY2 731 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 ZG16BQ96DA0 208 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 THUMPD3Q9BV44 507 aaKnown RBP12.57□□□□□ -0.4
COMMD3-208ENST00000470045 LIME1Q9H400 295 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 VIPAS39Q9H9C1 493 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms