RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 HS6ST2Q96MM7 605 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 TAAR9Q96RI9 348 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 NPFFR2Q9Y5X5 522 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 ZNF354AO60765 605 aaPredicted RBP16.62■□□□□ 0.25
SMC4-211ENST00000469858 MT-CO3P00414 261 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 FUT1P19526 365 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 MAKP20794 623 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 SMSP52788 366 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 PSPHP78330 225 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 TEKQ02763 1124 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 ZNF620Q6ZNG0 422 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 GPR141Q7Z602 305 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 TCEANCQ8N8B7 351 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 OR2Y1Q8NGV0 311 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 BPIFA2Q96DR5 249 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 MEPEQ9NQ76 525 aaPredicted RBP16.62■□□□□ 0.25
SMC4-211ENST00000469858 EXOSC3Q9NQT5 275 aaKnown RBP16.62■□□□□ 0.25
SMC4-211ENST00000469858 TBC1D23Q9NUY8 699 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 CLN6Q9NWW5 311 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 OR6C70A6NIJ9 312 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 ALG1L2C9J202 215 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 NDUFB5O43674 189 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 GMFGO60234 142 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 PCOLCEQ15113 449 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 XAF1Q6GPH4 301 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 SLC27A4Q6P1M0 643 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 CDK20Q8IZL9 346 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 OR5L2Q8NGL0 311 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 OR5M3Q8NGP4 307 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 ZPBPQ9BS86 351 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 ZNF426Q9BUY5 554 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 RBM38Q9H0Z9 239 aaKnown RBP16.61■□□□□ 0.25
SMC4-211ENST00000469858 SLC25A19Q9HC21 320 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 CCNB1IP1Q9NPC3 277 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 PLCXD1Q9NUJ7 323 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 TMEM5Q9Y2B1 443 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 PCNX2A6NKB5 2137 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 OTOGLQ3ZCN5 2332 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 CFAP54Q96N23 3096 aa16.61■□□□□ 0.25
SMC4-211ENST00000469858 LOC102723996A0A087X1L8 192 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 A0A1W2PQD3 144 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 UNC119BA6NIH7 251 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 TMEM200CA6NKL6 621 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 C17orf51A8MQB3 221 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 H3BSA7 217 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 HCRTR2O43614 444 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 RGS10O43665 173 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 SCO2O43819 266 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 PPM1BO75688 479 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 ZFAND5O76080 213 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 NGFRP08138 427 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 SAGP10523 405 aaPredicted RBP16.6■□□□□ 0.25
SMC4-211ENST00000469858 EVI2BP34910 448 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 FOLR3P41439 243 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 RBM34P42696 430 aaKnown RBP16.6■□□□□ 0.25
SMC4-211ENST00000469858 ZNF117Q03924 483 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 RAB39AQ14964 217 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 BTBD16Q32M84 506 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 PRSS33Q8NF86 280 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 OR8J1Q8NGP2 316 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 OR8K3Q8NH51 312 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 WDR36Q8NI36 951 aaKnown RBP16.6■□□□□ 0.25
SMC4-211ENST00000469858 DNAJA4Q8WW22 397 aaPredicted RBP16.6■□□□□ 0.25
SMC4-211ENST00000469858 IPCEF1Q8WWN9 437 aaPredicted RBP16.6■□□□□ 0.25
SMC4-211ENST00000469858 OSTF1Q92882 214 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 C3orf49Q96BT1 292 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 DDA1Q9BW61 102 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 TSSK6Q9BXA6 273 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 IL20Q9NYY1 176 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 IL20RAQ9UHF4 553 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 PSORS1C1Q9UIG5 152 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 PADI1Q9ULC6 663 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 PCDHGA1Q9Y5H4 931 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 CDH10Q9Y6N8 788 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 IGHV1-45A0A0A0MS14 117 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 A0A1W2PNU3 283 aaPredicted RBP16.6■□□□□ 0.25
SMC4-211ENST00000469858 PLD2O14939 933 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 PRKYO43930 277 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 MT-ND2P03891 347 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 PCYT1AP49585 367 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 FBXW4P57775 412 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 SNRPGP62308 76 aaKnown RBP16.6■□□□□ 0.25
SMC4-211ENST00000469858 HES3Q5TGS1 186 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 WBP2NLQ6ICG8 309 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 SLC30A6Q6NXT4 461 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 C6orf15Q6UXA7 325 aaPredicted RBP16.6■□□□□ 0.25
SMC4-211ENST00000469858 LINC00114Q6XXX2 140 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 FANK1Q8TC84 345 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 TRUB1Q8WWH5 349 aaKnown RBP16.6■□□□□ 0.25
SMC4-211ENST00000469858 DEPDC7Q96QD5 511 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 KLHDC3Q9BQ90 382 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 COPS4Q9BT78 406 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 LAT2Q9GZY6 243 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 FAM86C1Q9NVL1 165 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 GPR83Q9NYM4 423 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 DNAJC27Q9NZQ0 273 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 HS3ST3B1Q9Y662 390 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 MPDZO75970 2070 aa16.6■□□□□ 0.25
SMC4-211ENST00000469858 CCDC187A0A096LP49 1063 aa16.59■□□□□ 0.25
SMC4-211ENST00000469858 CLCA1A8K7I4 914 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms