RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 FAM180BQ6P0A1 224 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 SLC48A1Q6P1K1 146 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 LYPD8Q6UX82 237 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 DOLPP1Q86YN1 238 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 OR4K14Q8NGD5 310 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 SLC22A8Q8TCC7 542 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 MIPOL1Q8TD10 442 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 GIPC3Q8TF64 312 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 SLC38A5Q8WUX1 472 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 SLC35G5Q96KT7 338 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 APOL4Q9BPW4 351 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 GABARAPL3Q9BY60 117 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 TTTY12Q9BZ98 90 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 CXorf21Q9HAI6 301 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 KRT84Q9NSB2 600 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 SACM1LQ9NTJ5 587 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 GIMAP4Q9NUV9 329 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 KIF17Q9P2E2 1029 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 PSME2Q9UL46 239 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 NDRG4Q9ULP0 352 aaKnown RBP16.1■□□□□ 0.17
MRPL28-208ENST00000469744 ENTPD4Q9Y227 616 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 MEMO1Q9Y316 297 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 CACNA1CQ13936 2221 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 NINQ8N4C6 2090 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 ABCA12Q86UK0 2595 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 ARRDC5A6NEK1 342 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 CCDC160A6NGH7 325 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 H3BSA7 217 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 MRPS14O60783 128 aaKnown RBP16.1■□□□□ 0.17
MRPL28-208ENST00000469744 TPOP07202 933 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 CPMP14384 443 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 RHCEP18577 417 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 CSNK2A2P19784 350 aaPredicted RBP16.1■□□□□ 0.17
MRPL28-208ENST00000469744 CNR1P21554 472 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 NT5EP21589 574 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 ELK4P28324 431 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 GPC1P35052 558 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 KHKP50053 298 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 GNA13Q14344 377 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 PRAMEF20Q5VT98 475 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 PRAMEF8Q5VWM4 474 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 PRAMEF7Q5VXH5 474 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 MTFR2Q6P444 385 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 TSPYL5Q86VY4 417 aaPredicted RBP16.1■□□□□ 0.17
MRPL28-208ENST00000469744 GALNT12Q8IXK2 581 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 SAMD14Q8IZD0 417 aaPredicted RBP16.1■□□□□ 0.17
MRPL28-208ENST00000469744 ATG16L2Q8NAA4 619 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 OR56A1Q8NGH5 318 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 OR5M3Q8NGP4 307 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 ZNF420Q8TAQ5 688 aaPredicted RBP16.1■□□□□ 0.17
MRPL28-208ENST00000469744 SPACA9Q96E40 222 aaPredicted RBP16.1■□□□□ 0.17
MRPL28-208ENST00000469744 SGCZQ96LD1 299 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 ZNF607Q96SK3 696 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 PIP5K1AQ99755 562 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 FAM173AQ9BQD7 235 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 BCL2L10Q9HD36 194 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 EXD2Q9NVH0 621 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 P2RX2Q9UBL9 471 aa16.1■□□□□ 0.17
MRPL28-208ENST00000469744 NCKAP5O14513 1909 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 HMGN4O00479 90 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 PRRG2O14669 202 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 MITFO75030 526 aaPredicted RBP16.09■□□□□ 0.17
MRPL28-208ENST00000469744 ERAL1O75616 437 aaKnown RBP16.09■□□□□ 0.17
MRPL28-208ENST00000469744 MFN2O95140 757 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 OPN1SWP03999 348 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 P04436 131 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 CD247P20963 164 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 PTGS2P35354 604 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 FEN1P39748 380 aaKnown RBP16.09■□□□□ 0.17
MRPL28-208ENST00000469744 CLK3P49761 638 aaKnown RBP16.09■□□□□ 0.17
MRPL28-208ENST00000469744 NCBP2P52298 156 aaKnown RBP eCLIP16.09■□□□□ 0.17
MRPL28-208ENST00000469744 CASP9P55211 416 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 NUP107P57740 925 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 ROR2Q01974 943 aaKnown RBP16.09■□□□□ 0.17
MRPL28-208ENST00000469744 DUSP2Q05923 314 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 CDK5R2Q13319 367 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 CDSNQ15517 529 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 CTU2Q2VPK5 515 aaKnown RBP16.09■□□□□ 0.17
MRPL28-208ENST00000469744 RPTNQ6XPR3 784 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 CD163Q86VB7 1156 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 ZNF808Q8N4W9 903 aaPredicted RBP16.09■□□□□ 0.17
MRPL28-208ENST00000469744 OR10G3Q8NGC4 313 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 TMEM19Q96HH6 336 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 RIBC2Q9H4K1 309 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 FAM32AQ9Y421 112 aaKnown RBP16.09■□□□□ 0.17
MRPL28-208ENST00000469744 LIPGQ9Y5X9 500 aa16.09■□□□□ 0.17
MRPL28-208ENST00000469744 EXPH5Q8NEV8 1989 aa16.08■□□□□ 0.17
MRPL28-208ENST00000469744 ACOT7O00154 380 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 ADAM10O14672 748 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 SERPINB7O75635 380 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 IFNW1P05000 195 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 PORP16435 677 aaPredicted RBP16.08■□□□□ 0.16
MRPL28-208ENST00000469744 GALNSP34059 522 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 MPIP34949 423 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 MAGEA5P43359 124 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 LIMS1P48059 325 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 CSNK2BP67870 215 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 FOXO1Q12778 655 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 MAPK11Q15759 364 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 MICAQ29983 383 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms