RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 HS6ST1O60243 411 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 UBTFL6P0CB48 400 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-208ENST00000468300 GKN3PP0CG01 181 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 ITGAMP11215 1152 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 IL7RP16871 459 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 PCOLCEQ15113 449 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 LIN52Q52LA3 116 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 ENTPD8Q5MY95 495 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 PODNL1Q6PEZ8 512 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 MEX3BQ6ZN04 569 aaKnown RBP7.6□□□□□ -1.19
BRCA1-208ENST00000468300 C16orf47Q6ZP98 133 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-208ENST00000468300 CPEB2Q7Z5Q1 589 aaKnown RBP7.6□□□□□ -1.19
BRCA1-208ENST00000468300 MARCH9Q86YJ5 346 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 OFCC1Q8IZS5 231 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 FAM71CQ8NEG0 241 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 GIPC3Q8TF64 312 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 CNOT9Q92600 299 aaKnown RBP7.6□□□□□ -1.19
BRCA1-208ENST00000468300 DAZLQ92904 295 aaKnown RBP7.6□□□□□ -1.19
BRCA1-208ENST00000468300 LCORQ96JN0 433 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-208ENST00000468300 MUS81Q96NY9 551 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 DDA1Q9BW61 102 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 NCOR1P1Q9H4R4 102 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 Q9N2J8 555 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 CTPS2Q9NRF8 586 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 A0A1W2PQ72 361 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 C17orf51A8MQB3 221 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 STK17BO94768 372 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 NADKO95544 446 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-208ENST00000468300 LINGO3P0C6S8 592 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 SMIM18P0DKX4 95 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 IGFBP5P24593 272 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 EMP2P54851 167 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 NCF4Q15080 339 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 ZNHIT3Q15649 155 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-208ENST00000468300 CD226Q15762 336 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 CTU2Q2VPK5 515 aaKnown RBP7.59□□□□□ -1.19
BRCA1-208ENST00000468300 NDUFAF6Q330K2 333 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 CCDC157Q569K6 752 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 KRBOX4Q5JUW0 171 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 HES3Q5TGS1 186 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 CADM3Q8N126 398 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 C17orf47Q8NEP4 570 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 B3GNT7Q8NFL0 401 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 OR10G2Q8NGC3 310 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 PRR7Q8TB68 274 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 PCNX2A6NKB5 2137 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 C2orf92A0A1B0GVN3 265 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 OR6C76A6NM76 312 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 CPSF4LA6NMK7 179 aaKnown RBP7.59□□□□□ -1.19
BRCA1-208ENST00000468300 SOCS6O14544 535 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 OIP5O43482 229 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 H1F0P07305 194 aaKnown RBP7.59□□□□□ -1.19
BRCA1-208ENST00000468300 CYC1P08574 325 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 EDN3P14138 238 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 IFNA8P32881 189 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 CD97P48960 835 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 RNF4P78317 190 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 HPCAP84074 193 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 DCAF12Q5T6F0 453 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 PGBD2Q6P3X8 592 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 KLHL17Q6TDP4 642 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 IGF2-ASQ6U949 168 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 LYPD8Q6UX82 237 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 Q6ZPB1 254 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-208ENST00000468300 GDF7Q7Z4P5 450 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 STX12Q86Y82 276 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 NKAIN4Q8IVV8 208 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 PRR22Q8IZ63 422 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 SLC38A6Q8IZM9 456 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 DHRSXQ8N5I4 330 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 NAXEQ8NCW5 288 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 ADAMTS16Q8TE57 1224 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 TAAR9Q96RI9 348 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 MNTQ99583 582 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 NDRG4Q9ULP0 352 aaKnown RBP7.59□□□□□ -1.19
BRCA1-208ENST00000468300 SLC9A8Q9Y2E8 581 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 CBY1Q9Y3M2 126 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 HEATR5AQ86XA9 2040 aa7.59□□□□□ -1.19
BRCA1-208ENST00000468300 PCNX3Q9H6A9 2034 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 A0A087WUU8 490 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 IGHV1-45A0A0A0MS14 117 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 WISP1O95388 367 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 S100A9P06702 114 aaKnown RBP7.58□□□□□ -1.2
BRCA1-208ENST00000468300 CTRB1P17538 263 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 ATF4P18848 351 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-208ENST00000468300 TMED10P49755 219 aaKnown RBP7.58□□□□□ -1.2
BRCA1-208ENST00000468300 ATP12AP54707 1039 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 RAB15P59190 212 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 ISL1P61371 349 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 SGCAQ16586 387 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 C1orf185Q5T7R7 199 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 ZNF691Q5VV52 312 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 CTRB2Q6GPI1 263 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 DEPDC4Q8N2C3 294 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 DEFB124Q8NES8 71 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 CYGBQ8WWM9 190 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 IMMP1LQ96LU5 166 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 HS3ST3B1Q9Y662 390 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 LOC100130705A0A1B0GUX0 176 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 FAM221AA4D161 298 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms