RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 GDI2P50395 445 aaKnown RBP12.85□□□□□ -0.35
BRAT1-203ENST00000467558 CAPZA1P52907 286 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 GALK2Q01415 458 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 TCTN1Q2MV58 587 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 FBXO42Q6P3S6 717 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 PIWIL3Q7Z3Z3 882 aaKnown RBP12.85□□□□□ -0.35
BRAT1-203ENST00000467558 ETFBKMTQ8IXQ9 262 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 LRRC56Q8IYG6 542 aaPredicted RBP12.85□□□□□ -0.35
BRAT1-203ENST00000467558 SLC15A4Q8N697 577 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 SYT14Q8NB59 555 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 SLC37A3Q8NCC5 494 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 PRDM9Q9NQV7 894 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 RLIMQ9NVW2 624 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 RBMX2Q9Y388 322 aaKnown RBP12.85□□□□□ -0.35
BRAT1-203ENST00000467558 VASPP50552 380 aaPredicted RBP12.84□□□□□ -0.35
BRAT1-203ENST00000467558 MAB21L1Q13394 359 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 TP53I3Q53FA7 332 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 FAM160A2Q8N612 972 aaPredicted RBP12.84□□□□□ -0.35
BRAT1-203ENST00000467558 SPRYD4Q8WW59 207 aaPredicted RBP12.84□□□□□ -0.35
BRAT1-203ENST00000467558 OR5B2Q96R09 309 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 STACQ99469 402 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 IKZF5Q9H5V7 419 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 GAREM1Q9H706 876 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 SIDT1Q9NXL6 827 aaKnown RBP12.84□□□□□ -0.35
BRAT1-203ENST00000467558 C19orf53Q9UNZ5 99 aaPredicted RBP12.84□□□□□ -0.35
BRAT1-203ENST00000467558 ZNFX1Q9P2E3 1918 aaKnown RBP12.84□□□□□ -0.35
BRAT1-203ENST00000467558 NSG1A0A0A6YYJ2 146 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 A0A1W2PQL4 384 aaPredicted RBP12.84□□□□□ -0.35
BRAT1-203ENST00000467558 C5orf67F2Z3F1 127 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 HCRTR1O43613 425 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 ZNF28P17035 718 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 TRHRP34981 398 aaPredicted RBP12.84□□□□□ -0.35
BRAT1-203ENST00000467558 ADARB1P78563 741 aaKnown RBP12.84□□□□□ -0.35
BRAT1-203ENST00000467558 MLLT11Q13015 90 aaPredicted RBP12.84□□□□□ -0.35
BRAT1-203ENST00000467558 NKAIN2Q5VXU1 208 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 FAM109BQ6ICB4 259 aaPredicted RBP12.84□□□□□ -0.35
BRAT1-203ENST00000467558 TBPL2Q6SJ96 375 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 NDNFQ8TB73 568 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 ASB12Q8WXK4 309 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 SENP5Q96HI0 755 aaPredicted RBP12.84□□□□□ -0.35
BRAT1-203ENST00000467558 ABCG5Q9H222 651 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 ZNF385DQ9H6B1 395 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 TMEM185BQ9H7F4 350 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 ERVK13-1Q9NX77 482 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 NOX1Q9Y5S8 564 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 SLC22A7Q9Y694 548 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 OR6C70A6NIJ9 312 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 EEF1E1O43324 174 aaKnown RBP12.84□□□□□ -0.35
BRAT1-203ENST00000467558 YES1P07947 543 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 GRPEL2Q8TAA5 225 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 SFXN2Q96NB2 322 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 OR6C1Q96RD1 312 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 NIPSNAP1Q9BPW8 284 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 BABAM2Q9NXR7 383 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 PSORS1C1Q9UIG5 152 aa12.84□□□□□ -0.35
BRAT1-203ENST00000467558 MEGF11A6BM72 1044 aa12.83□□□□□ -0.35
BRAT1-203ENST00000467558 CLDN24A6NM45 220 aa12.83□□□□□ -0.35
BRAT1-203ENST00000467558 SSTR4P31391 388 aa12.83□□□□□ -0.35
BRAT1-203ENST00000467558 CD83Q01151 205 aa12.83□□□□□ -0.35
BRAT1-203ENST00000467558 ABCA11PQ4W5N1 156 aa12.83□□□□□ -0.35
BRAT1-203ENST00000467558 TRIM61Q5EBN2 209 aa12.83□□□□□ -0.35
BRAT1-203ENST00000467558 SPEM1Q8N4L4 309 aa12.83□□□□□ -0.35
BRAT1-203ENST00000467558 OR7G1Q8NGA0 311 aa12.83□□□□□ -0.35
BRAT1-203ENST00000467558 RPP25Q9BUL9 199 aaKnown RBP12.83□□□□□ -0.35
BRAT1-203ENST00000467558 TTYH1Q9H313 450 aaPredicted RBP12.83□□□□□ -0.35
BRAT1-203ENST00000467558 NXT1Q9UKK6 140 aaKnown RBP12.83□□□□□ -0.35
BRAT1-203ENST00000467558 ATXN7L1Q9ULK2 861 aaPredicted RBP12.83□□□□□ -0.35
BRAT1-203ENST00000467558 MICAL3Q7RTP6 2002 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 FAM227AF5H4B4 570 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 SULT2B1O00204 365 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 STOMP27105 288 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 OPRL1P41146 370 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 MMP21Q8N119 569 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 OR13C2Q8NGS9 318 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 INTS14Q96SY0 518 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 URM1Q9BTM9 101 aaKnown RBP12.83□□□□□ -0.36
BRAT1-203ENST00000467558 MEMO1Q9Y316 297 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 KNTC1P50748 2209 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 A0A0X1KG70 313 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 ACOT7O00154 380 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 YY2O15391 372 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 GYPBP06028 91 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 ST6GAL1P15907 406 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 CD1CP29017 333 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 OR1D5P58170 312 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 OR7A5Q15622 319 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 ZNF613Q6PF04 617 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 GDPD1Q8N9F7 314 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 RHOXF1Q8NHV9 184 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 MUL1Q969V5 352 aa12.83□□□□□ -0.36
BRAT1-203ENST00000467558 A0A1B0GWA3 101 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 EFCAB7A8K855 629 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 HMGN4O00479 90 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 GABRG2P18507 467 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 ADH7P40394 386 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 MRPL49Q13405 166 aaKnown RBP12.82□□□□□ -0.36
BRAT1-203ENST00000467558 SNTB2Q13425 540 aaKnown RBP12.82□□□□□ -0.36
BRAT1-203ENST00000467558 DUSP5Q16690 384 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 TRMT12Q53H54 448 aaKnown RBP12.82□□□□□ -0.36
BRAT1-203ENST00000467558 CCBE1Q6UXH8 406 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms