RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 KCNE5Q9UJ90 142 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 PLEKHA6Q9Y2H5 1048 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 AP4B1Q9Y6B7 739 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 MED12LQ86YW9 2145 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 A0A0G2JND7 137 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 A8MXE2 369 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 NR5A2O00482 541 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 MSTNO14793 375 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 CASKO14936 926 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 EIF4E2O60573 245 aaKnown RBP12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 H6PDO95479 791 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 CSTAP01040 98 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 ZCCHC18P0CG32 403 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 NR2F1P10589 423 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 UBL4AP11441 157 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 CRATP43155 626 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 CPA2P48052 419 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 CCR4P51679 360 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 CLDN15P56746 228 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 RPS3AP61247 264 aaKnown RBP12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 CHRNEQ04844 493 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 SF3A3Q12874 501 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 KEAP1Q14145 624 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 FGFBP1Q14512 234 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 TOMM34Q15785 309 aaPredicted RBP12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 MAPK14Q16539 360 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 SGCBQ16585 318 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 TMEM44Q2T9K0 475 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 DEFB113Q30KQ7 82 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 PLPPR5Q32ZL2 321 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 GTDC1Q4AE62 458 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 PPP4R4Q6NUP7 873 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 BLOC1S3Q6QNY0 202 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 FRRS1Q6ZNA5 592 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 ZNF619Q8N2I2 560 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 GTPBP8Q8N3Z3 284 aaPredicted RBP12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 ANKFN1Q8N957 763 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 LINC01560Q8TB33 94 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 GPR119Q8TDV5 335 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 GTF2H4Q92759 462 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 INTS12Q96CB8 462 aaKnown RBP12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 SPDL1Q96EA4 605 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 AURKBQ96GD4 344 aaPredicted RBP12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 RNF145Q96MT1 663 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 PINK1Q9BXM7 581 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 LIME1Q9H400 295 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 PLEKHF2Q9H8W4 249 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 POLE3Q9NRF9 147 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 PACSIN3Q9UKS6 424 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 LIPT1Q9Y234 373 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 HEATR5AQ86XA9 2040 aa12.64□□□□□ -0.39
CCHCR1-211ENST00000467553 CENPVL1A0A0U1RR11 272 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 EIF1AYO14602 144 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 KIAA0513O60268 411 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 ATE1O95260 518 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 TGM6O95932 706 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 LINGO3P0C6S8 592 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 UBTFL6P0CB48 400 aaPredicted RBP12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 ETFAP13804 333 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 ZNF17P17021 662 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 MRPL19P49406 292 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 TXNL4AP83876 142 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 FOXF2Q12947 444 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 SQLEQ14534 574 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 EIF3MQ7L2H7 374 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 ATP6V1C2Q8NEY4 427 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 TOR1AIP2Q8NFQ8 470 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 OR5W2Q8NH69 310 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 FBXO27Q8NI29 283 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 POC1BQ8TC44 478 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 ARSGQ96EG1 525 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 TRNT1Q96Q11 434 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 THUMPD3Q9BV44 507 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 LAT2Q9GZY6 243 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 PAIP1Q9H074 479 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 SAP130Q9H0E3 1048 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 QRSL1Q9H0R6 528 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 TMEM185BQ9H7F4 350 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 BEX4Q9NWD9 120 aaPredicted RBP12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 GALNT8Q9NY28 637 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 ICAM5Q9UMF0 924 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 PCDHB14Q9Y5E9 798 aa12.63□□□□□ -0.39
CCHCR1-211ENST00000467553 FLNAP21333 2647 aaKnown RBP12.62□□□□□ -0.39
CCHCR1-211ENST00000467553 SH3D21A4FU49 640 aa12.62□□□□□ -0.39
CCHCR1-211ENST00000467553 SLC22A20A6NK97 555 aa12.62□□□□□ -0.39
CCHCR1-211ENST00000467553 HRGP04196 525 aa12.62□□□□□ -0.39
CCHCR1-211ENST00000467553 VIMP08670 466 aaKnown RBP12.62□□□□□ -0.39
CCHCR1-211ENST00000467553 IL11P20809 199 aa12.62□□□□□ -0.39
CCHCR1-211ENST00000467553 ME2P23368 584 aa12.62□□□□□ -0.39
CCHCR1-211ENST00000467553 EIF1P41567 113 aaKnown RBP12.62□□□□□ -0.39
CCHCR1-211ENST00000467553 EIF1AXP47813 144 aaKnown RBP12.62□□□□□ -0.39
CCHCR1-211ENST00000467553 ATP4BP51164 291 aa12.62□□□□□ -0.39
CCHCR1-211ENST00000467553 SUMO3P55854 103 aaPredicted RBP12.62□□□□□ -0.39
CCHCR1-211ENST00000467553 RAC1P63000 192 aa12.62□□□□□ -0.39
CCHCR1-211ENST00000467553 ADAM8P78325 824 aa12.62□□□□□ -0.39
CCHCR1-211ENST00000467553 GUCY1A3Q02108 690 aa12.62□□□□□ -0.39
CCHCR1-211ENST00000467553 FOXF1Q12946 379 aa12.62□□□□□ -0.39
CCHCR1-211ENST00000467553 CBFBQ13951 182 aa12.62□□□□□ -0.39
CCHCR1-211ENST00000467553 LRRC74BQ6ZQY2 392 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms