RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 ECHDC2Q86YB7 292 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 TGIF2LXQ8IUE1 241 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 CCDC50Q8IVM0 306 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 CSNK1G2-AS1Q8NCQ2 148 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 FAM83FQ8NEG4 500 aaPredicted RBP3.29□□□□□ -1.88
SMC4-208ENST00000467468 OR2T33Q8NG76 320 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 OR51G2Q8NGK0 314 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 ADAMTS16Q8TE57 1224 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 SLC38A2Q96QD8 506 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 OR5B2Q96R09 309 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 COPS8Q99627 209 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 TM2D1Q9BX74 207 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 SPATA16Q9BXB7 569 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 OPN3Q9H1Y3 402 aaPredicted RBP3.29□□□□□ -1.88
SMC4-208ENST00000467468 ZFP14Q9HCL3 533 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 RAB20Q9NX57 234 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 PAK5Q9P286 719 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 SAMD4AQ9UPU9 718 aaKnown RBP3.29□□□□□ -1.88
SMC4-208ENST00000467468 IFT52Q9Y366 437 aa3.29□□□□□ -1.88
SMC4-208ENST00000467468 A0A1B0GVL5 298 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 H3BMQ9 156 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 SLC17A2O00624 439 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 RS1O15537 224 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 CRLF1O75462 422 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 UGT2B17O75795 530 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 CLDN9O95484 217 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 ALOX5P09917 674 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 ALPIP09923 528 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 CCR1P32246 355 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 RPL13AP40429 203 aaKnown RBP3.28□□□□□ -1.88
SMC4-208ENST00000467468 SSR1P43307 286 aaKnown RBP3.28□□□□□ -1.88
SMC4-208ENST00000467468 DUSP3P51452 185 aaPredicted RBP3.28□□□□□ -1.88
SMC4-208ENST00000467468 PRRX1P54821 245 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 SLC8A3P57103 927 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 VLDLRP98155 873 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 FCHO2Q0JRZ9 810 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 ST3GAL3Q11203 375 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 KLRB1Q12918 225 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 SRSF5Q13243 272 aaKnown RBP3.28□□□□□ -1.88
SMC4-208ENST00000467468 PLD1Q13393 1074 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 ABRAXAS2Q15018 415 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 KRT71Q3SY84 523 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 OR2A2Q6IF42 318 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 PAQR6Q6TCH4 344 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 REG3GQ6UW15 175 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 CCBE1Q6UXH8 406 aaPredicted RBP3.28□□□□□ -1.88
SMC4-208ENST00000467468 DHDDSQ86SQ9 333 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 TPRA1Q86W33 373 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 PAQR7Q86WK9 346 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 EGFL6Q8IUX8 553 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 TTC5Q8N0Z6 440 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 ABHD12Q8N2K0 398 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 KIR3DL3Q8N743 410 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 OR4D9Q8NGE8 314 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 OR1L4Q8NGR5 311 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 OR4Q3Q8NH05 313 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 C10orf35Q96D05 121 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 SLC35A5Q9BS91 424 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 LRRC61Q9BV99 259 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 TSSK1BQ9BXA7 367 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 ZBP1Q9H171 429 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 RHBGQ9H310 441 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 VCPKMTQ9H867 229 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 NUDT15Q9NV35 164 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 IMPAD1Q9NX62 359 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 SENP1Q9P0U3 644 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 L3MBTL1Q9Y468 752 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 NPTNQ9Y639 398 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 SMAD5-AS1Q9Y6J3 95 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 ATP10AO60312 1499 aa3.28□□□□□ -1.88
SMC4-208ENST00000467468 RPAP1Q9BWH6 1393 aaPredicted RBP3.27□□□□□ -1.89
SMC4-208ENST00000467468 ZNF840PA6NDX5 716 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 BTBD17A6NE02 478 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 FAM220BPB1ANY3 271 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 E9PQ18 207 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 LRRTM2O43300 516 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 RAMP3O60896 148 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 RENP00797 406 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 AGTP01019 485 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 SERPINA2P20848 420 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 GALP22466 123 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 ATP1B3P54709 279 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 LIM2P55344 173 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 PAX8Q06710 450 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 CD300CQ08708 224 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 PPP1R3AQ16821 1122 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 NHLRC3Q5JS37 347 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 C1orf220Q5T0J3 134 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 PRAMEF20Q5VT98 475 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 FAM199XQ6PEV8 388 aaPredicted RBP3.27□□□□□ -1.89
SMC4-208ENST00000467468 H2BFWTQ7Z2G1 175 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 SLC35F2Q8IXU6 374 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 SLC22A18ASQ8N1D0 253 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 Q8N377 158 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 FAM222BQ8WU58 562 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 TFB1MQ8WVM0 346 aaKnown RBP3.27□□□□□ -1.89
SMC4-208ENST00000467468 TRUB1Q8WWH5 349 aaKnown RBP3.27□□□□□ -1.89
SMC4-208ENST00000467468 EFHD2Q96C19 240 aaPredicted RBP3.27□□□□□ -1.89
SMC4-208ENST00000467468 C18orf12Q96KH6 178 aa3.27□□□□□ -1.89
SMC4-208ENST00000467468 NUP58Q9BVL2 599 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms