RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 DUX1O43812 170 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 PRAF2O60831 178 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 GLRA3O75311 464 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 CRLF1O75462 422 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 WBP4O75554 376 aaKnown RBP3.09□□□□□ -1.91
CCDC58-203ENST00000466854 OR2F2O95006 317 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 OR6A2O95222 327 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 GAS8O95995 478 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 MT-ND2P03891 347 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 STSP08842 583 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 ALPIP09923 528 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 SPP1P10451 314 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 PNMTP11086 282 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 CCNB1P14635 433 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 CPN1P15169 458 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 CNR1P21554 472 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 UQCRC2P22695 453 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 KIR3DL2P43630 455 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 IER3P46695 156 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 OR3A1P47881 315 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 RGS7P49802 495 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 GSDMDP57764 484 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 B3GALT5-AS1P59052 145 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 SEC61GP60059 68 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 ACTBP60709 375 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 HERV-K104P61576 105 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 YWHAGP61981 247 aaKnown RBP eCLIP3.09□□□□□ -1.91
CCDC58-203ENST00000466854 ACTA2P62736 377 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 PPIAP62937 165 aaKnown RBP3.09□□□□□ -1.91
CCDC58-203ENST00000466854 ACTG1P63261 375 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 ACTG2P63267 376 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 ACTC1P68032 377 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 ACTA1P68133 377 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 CALCOCO2Q13137 446 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 VEZF1Q14119 521 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 TEAD2Q15562 447 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 C18orf21Q32NC0 220 aaPredicted RBP3.09□□□□□ -1.91
CCDC58-203ENST00000466854 XKR7Q5GH72 579 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 MARCH8Q5T0T0 291 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 PDZK1Q5T2W1 519 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 C20orf194Q5TEA3 1177 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 ZSCAN25Q6NSZ9 544 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 C11orf63Q6NUN7 778 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 BTNL8Q6UX41 500 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 CD300LGQ6UXG3 332 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 WASH2PQ6VEQ5 465 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 LEKR1Q6ZMV7 388 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 PAGE2Q7Z2X7 111 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 ARHGAP22Q7Z5H3 698 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 SCD5Q86SK9 330 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 ST13P4Q8IZP2 240 aaPredicted RBP3.09□□□□□ -1.91
CCDC58-203ENST00000466854 LIX1Q8N485 282 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 NPEPL1Q8NDH3 523 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 OR4C5Q8NGB2 326 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 OR4A15Q8NGL6 344 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 LRRC20Q8TCA0 184 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 PHLDA1Q8WV24 401 aaPredicted RBP3.09□□□□□ -1.91
CCDC58-203ENST00000466854 SSMEM1Q8WWF3 244 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 ING5Q8WYH8 240 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 PIGCQ92535 297 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 NRGNQ92686 78 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 RFT1Q96AA3 541 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 TGS1Q96RS0 853 aaKnown RBP3.09□□□□□ -1.91
CCDC58-203ENST00000466854 CCNL2Q96S94 520 aaPredicted RBP3.09□□□□□ -1.91
CCDC58-203ENST00000466854 SEPHS2Q99611 448 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 CLEC7AQ9BXN2 247 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 FTHL17Q9BXU8 183 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 DGCR6LQ9BY27 220 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 RAB1BQ9H0U4 201 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 RIMS4Q9H426 269 aaPredicted RBP3.09□□□□□ -1.91
CCDC58-203ENST00000466854 CUEDC2Q9H467 287 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 ATP13A3Q9H7F0 1226 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 SP140LQ9H930 580 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 LYRM4Q9HD34 91 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 DNAJC4Q9NNZ3 241 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 MRPS30Q9NP92 439 aaKnown RBP3.09□□□□□ -1.91
CCDC58-203ENST00000466854 NT5MQ9NPB1 228 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 DMAP1Q9NPF5 467 aaPredicted RBP3.09□□□□□ -1.91
CCDC58-203ENST00000466854 FGF21Q9NSA1 209 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 HACD3Q9P035 362 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 PSMC3IPQ9P2W1 217 aaPredicted RBP3.09□□□□□ -1.91
CCDC58-203ENST00000466854 TUBGCP4Q9UGJ1 667 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 APOBEC3BQ9UH17 382 aaKnown RBP3.09□□□□□ -1.91
CCDC58-203ENST00000466854 ASIC3Q9UHC3 531 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 CLEC2DQ9UHP7 191 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 ZNF639Q9UID6 485 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 VANGL2Q9ULK5 521 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 B9D1Q9UPM9 204 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 FOXJ3Q9UPW0 622 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 SMAD5-AS1Q9Y6J3 95 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 FRMPD4Q14CM0 1322 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 ARFGEF2Q9Y6D5 1785 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 PLEKHH1Q9ULM0 1364 aa3.09□□□□□ -1.92
CCDC58-203ENST00000466854 LAMA2P24043 3122 aaKnown RBP3.08□□□□□ -1.92
CCDC58-203ENST00000466854 MAP2P11137 1827 aaKnown RBP3.08□□□□□ -1.92
CCDC58-203ENST00000466854 PRUNE2Q8WUY3 3088 aa3.08□□□□□ -1.92
CCDC58-203ENST00000466854 HTTP42858 3142 aa3.08□□□□□ -1.92
CCDC58-203ENST00000466854 GSTTP1A0A1W2PQM5 241 aa3.08□□□□□ -1.92
CCDC58-203ENST00000466854 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
CCDC58-203ENST00000466854 OR6C70A6NIJ9 312 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms