RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 SPIN1Q9Y657 262 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-206ENST00000466591 KCNE3Q9Y6H6 103 aa15.64■□□□□ 0.09
COL7A1-206ENST00000466591 IGHV3-15A0A0B4J1V0 119 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 TM9SF1O15321 606 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 BIRC5O15392 142 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 CLOCKO15516 846 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 OIP5O43482 229 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 TYROBPO43914 113 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 UBTFL6P0CB48 400 aaPredicted RBP15.63■□□□□ 0.09
COL7A1-206ENST00000466591 TFPIP10646 304 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 PGCP20142 388 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 ENPP1P22413 925 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 SHC1P29353 583 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 SLC1A6P48664 564 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 RPL14P50914 215 aaKnown RBP15.63■□□□□ 0.09
COL7A1-206ENST00000466591 CASP9P55211 416 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 LTBQ06643 244 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 SMU1Q2TAY7 513 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.63■□□□□ 0.09
COL7A1-206ENST00000466591 WDR93Q6P2C0 686 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 EIF3MQ7L2H7 374 aaKnown RBP15.63■□□□□ 0.09
COL7A1-206ENST00000466591 ANKRD46Q86W74 232 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 TUSC5Q8IXB3 177 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 RIMKLAQ8IXN7 391 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 CLEC4FQ8N1N0 589 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 GPR119Q8TDV5 335 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 XAGE5Q8WWM1 108 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 KISS1RQ969F8 398 aaPredicted RBP15.63■□□□□ 0.09
COL7A1-206ENST00000466591 S100PBPQ96BU1 408 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 SDF2Q99470 211 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 THUMPD3Q9BV44 507 aaKnown RBP15.63■□□□□ 0.09
COL7A1-206ENST00000466591 SRXN1Q9BYN0 137 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 ESRP2Q9H6T0 727 aaKnown RBP15.63■□□□□ 0.09
COL7A1-206ENST00000466591 AKTIPQ9H8T0 292 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 MKLN1Q9UL63 735 aa15.63■□□□□ 0.09
COL7A1-206ENST00000466591 PCNX3Q9H6A9 2034 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 A0A1W2PNR3 127 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 H7C1Q1 480 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 RNASET2O00584 256 aaKnown RBP15.62■□□□□ 0.09
COL7A1-206ENST00000466591 ITM2AO43736 263 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 YES1P07947 543 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 PSMB1P20618 241 aaKnown RBP15.62■□□□□ 0.09
COL7A1-206ENST00000466591 ARRB2P32121 409 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 KHKP50053 298 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 CLNS1AP54105 237 aaKnown RBP15.62■□□□□ 0.09
COL7A1-206ENST00000466591 MERTKQ12866 999 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 TOMM34Q15785 309 aaPredicted RBP15.62■□□□□ 0.09
COL7A1-206ENST00000466591 TIGD2Q4W5G0 525 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 GPAT3Q53EU6 434 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 EXOSC6Q5RKV6 272 aaKnown RBP15.62■□□□□ 0.09
COL7A1-206ENST00000466591 ZNF100Q8IYN0 542 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 ZNF619Q8N2I2 560 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 ZHX1-C8orf76Q96EF9 292 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 SMR3AQ99954 134 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 NMUR2Q9GZQ4 415 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 OR10A4Q9H209 315 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 OR51I1Q9H343 314 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 GP6Q9HCN6 339 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 ASIC5Q9NY37 505 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 WDR45Q9Y484 360 aa15.62■□□□□ 0.09
COL7A1-206ENST00000466591 HRNRQ86YZ3 2850 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-206ENST00000466591 SETD2Q9BYW2 2564 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-206ENST00000466591 THBDP07204 575 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 OR12D1P0DN82 309 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 LBPP18428 481 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 UQCRC2P22695 453 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 S100A3P33764 101 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 ANXA11P50995 505 aaKnown RBP15.61■□□□□ 0.09
COL7A1-206ENST00000466591 C21orf58P58505 322 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 CSNK2A1P68400 391 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-206ENST00000466591 RASGEF1BQ0VAM2 473 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 STX3Q13277 289 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 STK11Q15831 433 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 DPY19L1Q2PZI1 675 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 ARHGAP11BQ3KRB8 267 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 CEP85LQ5SZL2 805 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 HHATQ5VTY9 493 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 TNFAIP8L2Q6P589 184 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-206ENST00000466591 NUFIP2Q7Z417 695 aaKnown RBP15.61■□□□□ 0.09
COL7A1-206ENST00000466591 CROCCP2Q86T23 111 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 TRIML2Q8N7C3 387 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 ST8SIA1Q92185 356 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 ZBTB18Q99592 522 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 KLHDC3Q9BQ90 382 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 TMEM109Q9BVC6 243 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 NUF2Q9BZD4 464 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 LAT2Q9GZY6 243 aa15.61■□□□□ 0.09
COL7A1-206ENST00000466591 MARCOQ9UEW3 520 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-206ENST00000466591 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-206ENST00000466591 PRSS51A0A1B0GVH4 220 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 ADAP00813 363 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 FESP07332 822 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 CD3EP07766 207 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 BGNP21810 368 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 RYKP34925 604 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 ETV4P43268 484 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 PTH2RP49190 550 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 RAC3P60763 192 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 ZNF844Q08AG5 666 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 TSC22D1Q15714 1073 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms