RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 KIR3DL3Q8N743 410 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 OR4D5Q8NGN0 318 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 OR1F12Q8NHA8 337 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 TCTEX1D2Q8WW35 142 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 MRPS31Q92665 395 aaKnown RBP3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 FAF2Q96CS3 445 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 CELF6Q96J87 481 aaKnown RBP3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 SLC35A5Q9BS91 424 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 NXF5Q9H1B4 397 aaKnown RBP3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 IKZF5Q9H5V7 419 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 PAK1IP1Q9NWT1 392 aaPredicted RBP3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 SMPD3Q9NY59 655 aaPredicted RBP3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 B3GNT2Q9NY97 397 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 COX16Q9P0S2 106 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 ABCD2Q9UBJ2 740 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 TMEM110-MUSTN1A8MSY1 372 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 SULT2B1O00204 365 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 FCN1O00602 326 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 PRRG1O14668 218 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 TAPBPO15533 448 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 LALBAP00709 142 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 CA1P00915 261 aaPredicted RBP3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 CAPN1P07384 714 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 HSMCR30P0CW71 290 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 PNMTP11086 282 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 RNH1P13489 461 aaKnown RBP3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 YWHABP31946 246 aaKnown RBP3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 GRIA1P42261 906 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 P2RY1P47900 373 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 PLK1P53350 603 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 LIM2P55344 173 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 LRRC36Q1X8D7 754 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 CFAP221Q4G0U5 840 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 C10orf120Q5SQS8 335 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 BEND3Q5T5X7 828 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 RSBN1Q5VWQ0 802 aaPredicted RBP3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 SPINK14Q6IE38 97 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 ZCCHC7Q8N3Z6 543 aaKnown RBP3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 SVOPLQ8N434 492 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 PIGCQ92535 297 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 FGGYQ96C11 551 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 EFHD2Q96C19 240 aaPredicted RBP3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 PELI1Q96FA3 418 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 COQ2Q96H96 371 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 VSIG2Q96IQ7 327 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 CYP2S1Q96SQ9 504 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 DEFB126Q9BYW3 111 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 VCX2Q9H322 139 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 GLIPR2Q9H4G4 154 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 ZNF702PQ9H963 129 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 VNN3Q9NY84 501 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 OR1A1Q9P1Q5 309 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 Q9UF83 564 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 LCMT1Q9UIC8 334 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 KLHL21Q9UJP4 597 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 ANGPTL2Q9UKU9 493 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 ERVW-1Q9UQF0 538 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 CA5BQ9Y2D0 317 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 MMP24Q9Y5R2 645 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 RALGAPA1Q6GYQ0 2036 aa3.25□□□□□ -1.89
CDC42BPA-211ENST00000466538 ATP10AO60312 1499 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 TRAV26-1A0A087WT03 109 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 A0A1B0GWB2 263 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 METTL21EPA6NDL7 271 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 G3V4G9 280 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 RIPK2O43353 540 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 HCN1O60741 890 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 PGK1P00558 417 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 OPN1MWP04001 364 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 OPN1MW2P0DN77 364 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 OPN1MW3P0DN78 364 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 DBTP11182 482 aaKnown RBP3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 IMPDH1P20839 514 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 LAP3P28838 519 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 CEBPDP49716 269 aaPredicted RBP3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 CHRNB3Q05901 458 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 SLC10A7Q0GE19 358 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 IL24Q13007 206 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 DPYSL2Q16555 572 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 CEP55Q53EZ4 464 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 FAM199XQ6PEV8 388 aaPredicted RBP3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 KCNIP4Q6PIL6 250 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 CCDC137Q6PK04 289 aaKnown RBP3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 TFAP2EQ6VUC0 442 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 Q6ZPB1 254 aaPredicted RBP3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 MOB1BQ7L9L4 216 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 ZNF679Q8IYX0 411 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 ZBED8Q8IZ13 594 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 LINC00612Q8N6U2 182 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 TRPV1Q8NER1 839 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 HAVCR1Q96D42 359 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 SLC41A3Q96GZ6 507 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 SLC39A3Q9BRY0 314 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 EDEM2Q9BV94 578 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 SRXN1Q9BYN0 137 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 RHBGQ9H310 441 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 SLC17A5Q9NRA2 495 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 SLC7A10Q9NS82 523 aa3.24□□□□□ -1.89
CDC42BPA-211ENST00000466538 ZNF275Q9NSD4 429 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms