RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 HDHD5Q9BXW7 423 aa17.05■□□□□ 0.32
COL9A3-206ENST00000466532 ROPN1BQ9BZX4 212 aaPredicted RBP17.05■□□□□ 0.32
COL9A3-206ENST00000466532 ROPN1Q9HAT0 212 aaPredicted RBP17.05■□□□□ 0.32
COL9A3-206ENST00000466532 ZANQ9Y493 2812 aa17.05■□□□□ 0.32
COL9A3-206ENST00000466532 EIF4E2O60573 245 aaKnown RBP17.04■□□□□ 0.32
COL9A3-206ENST00000466532 UBL4AP11441 157 aa17.04■□□□□ 0.32
COL9A3-206ENST00000466532 IL32P24001 234 aa17.04■□□□□ 0.32
COL9A3-206ENST00000466532 SLC7A1P30825 629 aa17.04■□□□□ 0.32
COL9A3-206ENST00000466532 VSNL1P62760 191 aa17.04■□□□□ 0.32
COL9A3-206ENST00000466532 RPS26P62854 115 aaKnown RBP17.04■□□□□ 0.32
COL9A3-206ENST00000466532 MAD2L1Q13257 205 aaPredicted RBP17.04■□□□□ 0.32
COL9A3-206ENST00000466532 CBFBQ13951 182 aa17.04■□□□□ 0.32
COL9A3-206ENST00000466532 PDZK1Q5T2W1 519 aa17.04■□□□□ 0.32
COL9A3-206ENST00000466532 ZNF611Q8N823 705 aa17.04■□□□□ 0.32
COL9A3-206ENST00000466532 OR5W2Q8NH69 310 aa17.04■□□□□ 0.32
COL9A3-206ENST00000466532 AKAP1Q92667 903 aaKnown RBP eCLIP17.04■□□□□ 0.32
COL9A3-206ENST00000466532 ZNF524Q96C55 264 aa17.04■□□□□ 0.32
COL9A3-206ENST00000466532 CXorf56Q9H5V9 222 aa17.04■□□□□ 0.32
COL9A3-206ENST00000466532 GP6Q9HCN6 339 aa17.04■□□□□ 0.32
COL9A3-206ENST00000466532 ABCA2Q9BZC7 2435 aa17.04■□□□□ 0.32
COL9A3-206ENST00000466532 IGHV3-15A0A0B4J1V0 119 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 A0A1W2PNR3 127 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 CNOT4O95628 575 aaKnown RBP17.03■□□□□ 0.32
COL9A3-206ENST00000466532 YES1P07947 543 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 PAX1P15863 534 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 MATN1P21941 496 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 ENPP1P22413 925 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 CLDN8P56748 225 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 C21orf58P58505 322 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 QPRTQ15274 297 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 GPR68Q15743 365 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 SLC25A53Q5H9E4 307 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 SFRP5Q5T4F7 317 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 C6orf120Q7Z4R8 191 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 CLECL1Q8IZS7 167 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 SLC43A2Q8N370 569 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 RAB3IL1Q8TBN0 382 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 NMUR2Q9GZQ4 415 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 SERHL2Q9H4I8 314 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 ZNF701Q9NV72 531 aaPredicted RBP17.03■□□□□ 0.32
COL9A3-206ENST00000466532 NOP53Q9NZM5 478 aaKnown RBP17.03■□□□□ 0.32
COL9A3-206ENST00000466532 TLN2Q9Y4G6 2542 aa17.03■□□□□ 0.32
COL9A3-206ENST00000466532 RNF103-CHMP3A0A140T963 221 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 SERINC4A6NH21 518 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 DUXAA6NLW8 204 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 TYROBPO43914 113 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 TMCC2O75069 709 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 CYP7B1O75881 506 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 ADAP00813 363 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 ETV4P43268 484 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 RAC3P60763 192 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 EMX2Q04743 252 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 TAB1Q15750 504 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 OR4F3Q6IEY1 312 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 NUDCD3Q8IVD9 361 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 CLEC4FQ8N1N0 589 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 ZNF619Q8N2I2 560 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 ARL8AQ96BM9 186 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 SLC35G5Q96KT7 338 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 PPP1R36Q96LQ0 422 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 ASIC5Q9NY37 505 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 KLHL9Q9P2J3 617 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 LAMP3Q9UQV4 416 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 RNF115Q9Y4L5 304 aa17.02■□□□□ 0.32
COL9A3-206ENST00000466532 CR1P17927 2039 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 ESPNB1AK53 854 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 CLOCKO15516 846 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 STX11O75558 287 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 AK1P00568 194 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 PCSK6P29122 969 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 ATP5J2P56134 94 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 CAPRIN1Q14444 709 aaKnown RBP17.01■□□□□ 0.31
COL9A3-206ENST00000466532 P2RY6Q15077 328 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 ZNF141Q15928 474 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 PDCD2Q16342 344 aaPredicted RBP17.01■□□□□ 0.31
COL9A3-206ENST00000466532 TIGD2Q4W5G0 525 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 C3orf33Q6P1S2 294 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 OLIG3Q7RTU3 272 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 KISS1RQ969F8 398 aaPredicted RBP17.01■□□□□ 0.31
COL9A3-206ENST00000466532 PKNOX2Q96KN3 472 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 OR5B2Q96R09 309 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 PSD2Q9BQI7 771 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 THUMPD3Q9BV44 507 aaKnown RBP17.01■□□□□ 0.31
COL9A3-206ENST00000466532 LAT2Q9GZY6 243 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 QRSL1Q9H0R6 528 aaKnown RBP17.01■□□□□ 0.31
COL9A3-206ENST00000466532 ESRP2Q9H6T0 727 aaKnown RBP17.01■□□□□ 0.31
COL9A3-206ENST00000466532 BCO1Q9HAY6 547 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 NGBQ9NPG2 151 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 KCNE5Q9UJ90 142 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 MKLN1Q9UL63 735 aa17.01■□□□□ 0.31
COL9A3-206ENST00000466532 ZNF814B7Z6K7 855 aa17■□□□□ 0.31
COL9A3-206ENST00000466532 ETV2O00321 342 aaPredicted RBP17■□□□□ 0.31
COL9A3-206ENST00000466532 ITM2AO43736 263 aa17■□□□□ 0.31
COL9A3-206ENST00000466532 FCMRO60667 390 aa17■□□□□ 0.31
COL9A3-206ENST00000466532 H6PDO95479 791 aa17■□□□□ 0.31
COL9A3-206ENST00000466532 CD3EP07766 207 aa17■□□□□ 0.31
COL9A3-206ENST00000466532 RPS4XP62701 263 aaKnown RBP17■□□□□ 0.31
COL9A3-206ENST00000466532 RASGEF1BQ0VAM2 473 aa17■□□□□ 0.31
COL9A3-206ENST00000466532 SKP2Q13309 424 aa17■□□□□ 0.31
COL9A3-206ENST00000466532 ITGADQ13349 1161 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms