RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 GNRHR2Q96P88 292 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 PRR14Q9BWN1 585 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 MFRPQ9BY79 579 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 TTTY12Q9BZ98 90 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 AMBRA1Q9C0C7 1298 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 IL1RAPQ9NPH3 570 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 CCM2LQ9NUG4 571 aaPredicted RBP10.13□□□□□ -0.79
VCP-204ENST00000466100 KLHL28Q9NXS3 571 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 NDUFAF4Q9P032 175 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 TESQ9UGI8 421 aaKnown RBP10.13□□□□□ -0.79
VCP-204ENST00000466100 ACAD8Q9UKU7 415 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 BOKQ9UMX3 212 aaPredicted RBP10.13□□□□□ -0.79
VCP-204ENST00000466100 SLC9A8Q9Y2E8 581 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 NTNG1Q9Y2I2 539 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 RP1L1Q8IWN7 2480 aaPredicted RBP10.12□□□□□ -0.79
VCP-204ENST00000466100 H3BNX3 289 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 ENTPD5O75356 428 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 CBR3O75828 277 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 LYPD3O95274 346 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 NTN1O95631 604 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 THY1P04216 161 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 IFNW1P05000 195 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 LINGO3P0C6S8 592 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 RAP2AP10114 183 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 RFC3P40938 356 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 CCR4P51679 360 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 PMP22Q01453 160 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 CBFBQ13951 182 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 INAQ16352 499 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 TMEM44Q2T9K0 475 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 PLPPR5Q32ZL2 321 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 NADK2Q4G0N4 442 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 FAM98BQ52LJ0 330 aaKnown RBP10.12□□□□□ -0.79
VCP-204ENST00000466100 SLC25A53Q5H9E4 307 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 RNFT1Q5M7Z0 435 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 ARSKQ6UWY0 536 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 FKBP9P1Q75LS8 142 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 PIWIL3Q7Z3Z3 882 aaKnown RBP10.12□□□□□ -0.79
VCP-204ENST00000466100 ZNF605Q86T29 641 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 TMEM251Q8N6I4 163 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 LSMEM1Q8N8F7 131 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 OR4K17Q8NGC6 315 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 WBP1Q96G27 269 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 RSRC1Q96IZ7 334 aaKnown RBP10.12□□□□□ -0.79
VCP-204ENST00000466100 TAAR6Q96RI8 345 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 SEPHS2Q99611 448 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 NPAS1Q99742 590 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 UGT2B28Q9BY64 529 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 OR2B2Q9GZK3 357 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 MED17Q9NVC6 651 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 SLC13A4Q9UKG4 626 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 A4GNTQ9UNA3 340 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 ENPP4Q9Y6X5 453 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 SHANK1Q9Y566 2161 aa10.12□□□□□ -0.79
VCP-204ENST00000466100 FAM208BQ5VWN6 2430 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 C7orf72A4D263 438 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 J3KTA2 159 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 hCG_2039718K7EN88 272 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 FFAR1O14842 300 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 GMFGO60234 142 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 ZIC3O60481 467 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 FKBP6O75344 327 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 CYP7B1O75881 506 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 MT-ND1P03886 318 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 PRKCAP17252 672 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 HOXB6P17509 224 aaKnown RBP10.11□□□□□ -0.79
VCP-204ENST00000466100 PGCP20142 388 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 FUT4P22083 530 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 PSMA4P25789 261 aaKnown RBP10.11□□□□□ -0.79
VCP-204ENST00000466100 SLC7A1P30825 629 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 SRD5A2P31213 254 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 RYKP34925 604 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 DSCR4P56555 118 aaPredicted RBP10.11□□□□□ -0.79
VCP-204ENST00000466100 B3GALT5-AS1P59052 145 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 ELF3P78545 371 aaPredicted RBP10.11□□□□□ -0.79
VCP-204ENST00000466100 FOXK1P85037 733 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 CHRNB3Q05901 458 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 GTF3C1Q12789 2109 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 GANABQ14697 944 aaKnown RBP10.11□□□□□ -0.79
VCP-204ENST00000466100 QPRTQ15274 297 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 ENTPD8Q5MY95 495 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 DEF8Q6ZN54 512 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 RANBP3LQ86VV4 465 aaPredicted RBP10.11□□□□□ -0.79
VCP-204ENST00000466100 ZDHHC21Q8IVQ6 265 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 SIAH3Q8IW03 269 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 POC1BQ8TC44 478 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 ST8SIA1Q92185 356 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 C3orf49Q96BT1 292 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 DHRS1Q96LJ7 313 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 PRRC1Q96M27 445 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 JSRP1Q96MG2 331 aaPredicted RBP10.11□□□□□ -0.79
VCP-204ENST00000466100 ZNF300Q96RE9 604 aaPredicted RBP10.11□□□□□ -0.79
VCP-204ENST00000466100 MCHR1Q99705 422 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 ZNF559Q9BR84 538 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 TRIM2Q9C040 744 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 POLR2J2Q9GZM3 115 aaKnown RBP10.11□□□□□ -0.79
VCP-204ENST00000466100 POLR2J3Q9H1A7 115 aaKnown RBP10.11□□□□□ -0.79
VCP-204ENST00000466100 SLC25A18Q9H1K4 315 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 ZDHHC11Q9H8X9 412 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 MAN2C1Q9NTJ4 1040 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms