RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 SNRPGP15A8MWD9 76 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 GABARAPH6UMI1 98 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 J3QLW9 94 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 AIPO00170 330 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 EMC8O43402 210 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 CLEC3AO75596 197 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 RP2O75695 350 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 CTSLP07711 333 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 SBK2P0C263 348 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 ZNF19P17023 458 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 GJA1P17302 382 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 S100A11P31949 105 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 FLT3LGP49771 235 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 HTR4Q13639 388 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 SFRP4Q6FHJ7 346 aaPredicted RBP18.32■□□□□ 0.52
SDF4-205ENST00000465727 ADIPOR2Q86V24 386 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 ZNF547Q8IVP9 402 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 MEIOBQ8N635 442 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 CXorf58Q96LI9 332 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 TEAD3Q99594 435 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 UTP23Q9BRU9 249 aaKnown RBP18.32■□□□□ 0.52
SDF4-205ENST00000465727 C1QTNF6Q9BXI9 259 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 MED20Q9H944 212 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 TAS2R5Q9NYW4 299 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 MAFFQ9ULX9 164 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 FLVCR2Q9UPI3 526 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 PCDHGA9Q9Y5G4 932 aaKnown RBP18.32■□□□□ 0.52
SDF4-205ENST00000465727 HRH3Q9Y5N1 445 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 ZC3H12DA2A288 527 aaKnown RBP18.32■□□□□ 0.52
SDF4-205ENST00000465727 OR2M5A3KFT3 312 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 HMSDA8MTL9 139 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 CREBL2O60519 120 aaPredicted RBP18.32■□□□□ 0.52
SDF4-205ENST00000465727 GMDSO60547 372 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 REM1O75628 298 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 GATBO75879 557 aaKnown RBP18.32■□□□□ 0.52
SDF4-205ENST00000465727 RGS11O94810 467 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 RPN2P04844 631 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 NT5EP21589 574 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 ACVR1BP36896 505 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 MECP2P51608 486 aaKnown RBP18.32■□□□□ 0.52
SDF4-205ENST00000465727 TMEM35AQ53FP2 167 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 PRSS45Q7RTY3 260 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 BVESQ8NE79 360 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 VN1R2Q8NFZ6 395 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 AUTS2Q8WXX7 1259 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 C16orf58Q96GQ5 468 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 CD180Q99467 661 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 OR10A4Q9H209 315 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 HAO2Q9NYQ3 351 aa18.32■□□□□ 0.52
SDF4-205ENST00000465727 MID1O15344 667 aa18.31■□□□□ 0.52
SDF4-205ENST00000465727 OR1F1O43749 312 aa18.31■□□□□ 0.52
SDF4-205ENST00000465727 IL5P05113 134 aa18.31■□□□□ 0.52
SDF4-205ENST00000465727 PSMA6P60900 246 aaKnown RBP18.31■□□□□ 0.52
SDF4-205ENST00000465727 ZNF85Q03923 595 aa18.31■□□□□ 0.52
SDF4-205ENST00000465727 POU4F2Q12837 409 aa18.31■□□□□ 0.52
SDF4-205ENST00000465727 SLC9A5Q14940 896 aa18.31■□□□□ 0.52
SDF4-205ENST00000465727 GPNMBQ14956 572 aa18.31■□□□□ 0.52
SDF4-205ENST00000465727 ZNF765Q7L2R6 523 aa18.31■□□□□ 0.52
SDF4-205ENST00000465727 LINGO2Q7L985 606 aa18.31■□□□□ 0.52
SDF4-205ENST00000465727 IFNL1Q8IU54 200 aa18.31■□□□□ 0.52
SDF4-205ENST00000465727 RNF113BQ8IZP6 322 aaKnown RBP18.31■□□□□ 0.52
SDF4-205ENST00000465727 AMER3Q8N944 861 aa18.31■□□□□ 0.52
SDF4-205ENST00000465727 ZNF671Q8TAW3 534 aa18.31■□□□□ 0.52
SDF4-205ENST00000465727 ZG16BQ96DA0 208 aa18.31■□□□□ 0.52
SDF4-205ENST00000465727 HS6ST2Q96MM7 605 aa18.31■□□□□ 0.52
SDF4-205ENST00000465727 TTYH1Q9H313 450 aaPredicted RBP18.31■□□□□ 0.52
SDF4-205ENST00000465727 KLHL9Q9P2J3 617 aa18.31■□□□□ 0.52
SDF4-205ENST00000465727 SLC7A7Q9UM01 511 aa18.31■□□□□ 0.52
SDF4-205ENST00000465727 CDHR4A6H8M9 788 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 NEDD8-MDP1E9PL57 170 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 H7BY64 318 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 ARPC1BO15143 372 aaKnown RBP18.3■□□□□ 0.52
SDF4-205ENST00000465727 SULT1B1O43704 296 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 ERAL1O75616 437 aaKnown RBP18.3■□□□□ 0.52
SDF4-205ENST00000465727 RCBTB2O95199 551 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 UCHL1P09936 223 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 PRG2P13727 222 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 PRKAR2AP13861 404 aaKnown RBP18.3■□□□□ 0.52
SDF4-205ENST00000465727 MRPS10P82664 201 aaKnown RBP18.3■□□□□ 0.52
SDF4-205ENST00000465727 HLXQ14774 488 aaPredicted RBP18.3■□□□□ 0.52
SDF4-205ENST00000465727 OLFML2AQ68BL7 652 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 ZNF626Q68DY1 528 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 ESPNLQ6ZVH7 1005 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 TMEM25Q86YD3 366 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 TTLQ8NG68 377 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 PRAP1Q96NZ9 151 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 HCAR1Q9BXC0 346 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 CACYBPQ9HB71 228 aaKnown RBP18.3■□□□□ 0.52
SDF4-205ENST00000465727 ADGRL4Q9HBW9 690 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 POLMQ9NP87 494 aaPredicted RBP18.3■□□□□ 0.52
SDF4-205ENST00000465727 SIDT1Q9NXL6 827 aaKnown RBP18.3■□□□□ 0.52
SDF4-205ENST00000465727 ST6GALNAC2Q9UJ37 374 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 SUSD5O60279 629 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 PAPLNO95428 1278 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 PPP3CBP16298 524 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 RAB3AP20336 220 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 MAT2AP31153 395 aaKnown RBP18.3■□□□□ 0.52
SDF4-205ENST00000465727 OR12D2P58182 307 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 STXBP1P61764 594 aaKnown RBP18.3■□□□□ 0.52
SDF4-205ENST00000465727 C9orf64Q5T6V5 341 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms