RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 OR52M1Q8NGK5 317 aa2.33□□□□□ -2.04
GARNL3-213ENST00000464616 ZNF671Q8TAW3 534 aa2.33□□□□□ -2.04
GARNL3-213ENST00000464616 EMG1Q92979 244 aaKnown RBP2.33□□□□□ -2.04
GARNL3-213ENST00000464616 C18orf25Q96B23 403 aaPredicted RBP2.33□□□□□ -2.04
GARNL3-213ENST00000464616 FAM122AQ96E09 287 aa2.33□□□□□ -2.04
GARNL3-213ENST00000464616 TTC25Q96NG3 672 aa2.33□□□□□ -2.04
GARNL3-213ENST00000464616 TGM7Q96PF1 710 aa2.33□□□□□ -2.04
GARNL3-213ENST00000464616 CITED1Q99966 193 aa2.33□□□□□ -2.04
GARNL3-213ENST00000464616 ERP44Q9BS26 406 aa2.33□□□□□ -2.04
GARNL3-213ENST00000464616 NIPSNAP3BQ9BS92 247 aa2.33□□□□□ -2.04
GARNL3-213ENST00000464616 TMEM121Q9BTD3 319 aa2.33□□□□□ -2.04
GARNL3-213ENST00000464616 RAB34Q9BZG1 259 aa2.33□□□□□ -2.04
GARNL3-213ENST00000464616 SLITRK2Q9H156 845 aa2.33□□□□□ -2.04
GARNL3-213ENST00000464616 NXF5Q9H1B4 397 aaKnown RBP2.33□□□□□ -2.04
GARNL3-213ENST00000464616 ELOVL3Q9HB03 270 aa2.33□□□□□ -2.04
GARNL3-213ENST00000464616 UFSP2Q9NUQ7 469 aa2.33□□□□□ -2.04
GARNL3-213ENST00000464616 ANAPC11Q9NYG5 84 aa2.33□□□□□ -2.04
GARNL3-213ENST00000464616 WRAP73Q9P2S5 460 aaPredicted RBP2.33□□□□□ -2.04
GARNL3-213ENST00000464616 KLHL21Q9UJP4 597 aa2.33□□□□□ -2.04
GARNL3-213ENST00000464616 PLLPQ9Y342 182 aa2.33□□□□□ -2.04
GARNL3-213ENST00000464616 FRMPD4Q14CM0 1322 aa2.33□□□□□ -2.04
GARNL3-213ENST00000464616 ATP10DQ9P241 1426 aa2.33□□□□□ -2.04
GARNL3-213ENST00000464616 IGHV7-81A0A0B4J1V7 117 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 IGHV3-35A0A0C4DH35 117 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 IGHV2-70DA0A0C4DH43 119 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 FAM240BA0A1B0GVZ2 78 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 ESYT2A0FGR8 921 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 PP2D1A8MPX8 630 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 GOLGA8SH3BPF8 625 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 TNFSF11O14788 317 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 OR1F1O43749 312 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 LYPLA1O75608 230 aaPredicted RBP2.32□□□□□ -2.04
GARNL3-213ENST00000464616 PALMO75781 387 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 MBD3O95983 291 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 IQCF3P0C7M6 154 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 XRCC1P18887 633 aaPredicted RBP2.32□□□□□ -2.04
GARNL3-213ENST00000464616 GDF1P27539 372 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 GCKP35557 465 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 HPCAL1P37235 193 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 GRIA1P42261 906 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 KIR2DS2P43631 304 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 RPL29P47914 159 aaKnown RBP2.32□□□□□ -2.04
GARNL3-213ENST00000464616 MEOX2P50222 304 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 HMGN5P82970 282 aaKnown RBP2.32□□□□□ -2.04
GARNL3-213ENST00000464616 TNFRSF17Q02223 184 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 MAP2K1Q02750 393 aaPredicted RBP2.32□□□□□ -2.04
GARNL3-213ENST00000464616 IL24Q13007 206 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 LAGE3Q14657 143 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 PRR4Q16378 134 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 DPYSL2Q16555 572 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 CCDC152Q4G0S7 254 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 CFAP221Q4G0U5 840 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 ATF7IP2Q5U623 682 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 UFSP1Q6NVU6 142 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 WDR74Q6RFH5 385 aaPredicted RBP2.32□□□□□ -2.04
GARNL3-213ENST00000464616 RGS9BPQ6ZS82 235 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 CCDC80Q76M96 950 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 RUFY3Q7L099 469 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 TGIF2LXQ8IUE1 241 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 SKA3Q8IX90 412 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 NRMQ8IXM6 262 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 CLEC4FQ8N1N0 589 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 IPMKQ8NFU5 416 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 OR13F1Q8NGS4 319 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 OR2T34Q8NGX1 318 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 CNIH3Q8TBE1 160 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 ADAMTS16Q8TE57 1224 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 DNAJA4Q8WW22 397 aaPredicted RBP2.32□□□□□ -2.04
GARNL3-213ENST00000464616 MAIP1Q8WWC4 291 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 FAM3CQ92520 227 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 OSTF1Q92882 214 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 PSMG2Q969U7 264 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 EFHD2Q96C19 240 aaPredicted RBP2.32□□□□□ -2.04
GARNL3-213ENST00000464616 C12orf66Q96MD2 445 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 RPRD1AQ96P16 312 aaPredicted RBP2.32□□□□□ -2.04
GARNL3-213ENST00000464616 TM2D1Q9BX74 207 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 CALHM2Q9HA72 323 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 MIEF1Q9NQG6 463 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 UTP6Q9NYH9 597 aaKnown RBP2.32□□□□□ -2.04
GARNL3-213ENST00000464616 ZNF221Q9UK13 617 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 KIF25-AS1Q9Y6Z4 181 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 PNPLA6Q8IY17 1366 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 PTCH1Q13635 1447 aa2.32□□□□□ -2.04
GARNL3-213ENST00000464616 IGLV8-61A0A075B6I0 122 aa2.31□□□□□ -2.04
GARNL3-213ENST00000464616 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.31□□□□□ -2.04
GARNL3-213ENST00000464616 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.31□□□□□ -2.04
GARNL3-213ENST00000464616 CCDC182A6NF36 153 aa2.31□□□□□ -2.04
GARNL3-213ENST00000464616 HELTA6NFD8 242 aa2.31□□□□□ -2.04
GARNL3-213ENST00000464616 G3V4G9 280 aa2.31□□□□□ -2.04
GARNL3-213ENST00000464616 SAP18O00422 153 aaKnown RBP2.31□□□□□ -2.04
GARNL3-213ENST00000464616 POLR2DO15514 142 aaKnown RBP2.31□□□□□ -2.04
GARNL3-213ENST00000464616 HCN1O60741 890 aa2.31□□□□□ -2.04
GARNL3-213ENST00000464616 MTX2O75431 263 aa2.31□□□□□ -2.04
GARNL3-213ENST00000464616 B3GAT3O94766 335 aa2.31□□□□□ -2.04
GARNL3-213ENST00000464616 IGHG3P01860 377 aa2.31□□□□□ -2.04
GARNL3-213ENST00000464616 CCDC130P13994 396 aa2.31□□□□□ -2.04
GARNL3-213ENST00000464616 POU2F1P14859 743 aa2.31□□□□□ -2.04
GARNL3-213ENST00000464616 CPN1P15169 458 aa2.31□□□□□ -2.04
GARNL3-213ENST00000464616 PTBP1P26599 531 aaKnown RBP eCLIP2.31□□□□□ -2.049e-6■■■■□ 22.3
GARNL3-213ENST00000464616 EPHX2P34913 555 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms