RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 EXOSC6Q5RKV6 272 aaKnown RBP6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 CLVS2Q5SYC1 327 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 RGS7BPQ6MZT1 257 aaPredicted RBP6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 GLDNQ6ZMI3 551 aaPredicted RBP6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 ZNF620Q6ZNG0 422 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 TMEM91Q6ZNR0 172 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 ZNF765Q7L2R6 523 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 CHMP1BQ7LBR1 199 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 OTOP2Q7RTS6 562 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 TMCO2Q7Z6W1 182 aaPredicted RBP6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 KRT77Q7Z794 578 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 PXKQ7Z7A4 578 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 GLCCI1Q86VQ1 547 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 MCATQ8IVS2 390 aaKnown RBP6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 LINC00518Q8N0U6 118 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 OR4N4Q8N0Y3 316 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 SYS1Q8N2H4 156 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 RNF175Q8N4F7 328 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 TTC9BQ8N6N2 239 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 POMGNT2Q8NAT1 580 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC43A3Q8NBI5 491 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 ZBTB44Q8NCP5 570 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 BVESQ8NE79 360 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 OR8D4Q8NGM9 314 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 OR6K2Q8NGY2 324 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 ZNF480Q8WV37 535 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 XAGE5Q8WWM1 108 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 EDAQ92838 391 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 ORAI1Q96D31 301 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 PHYHIPLQ96FC7 376 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 ELMOD3Q96FG2 381 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 S100A16Q96FQ6 103 aaKnown RBP6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 OR2A7Q96R45 310 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 UQCC2Q9BRT2 126 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 NRSN2Q9GZP1 204 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 ABCG4Q9H172 646 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 ZCCHC4Q9H5U6 513 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 KLHL1Q9NR64 748 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 SEMA4GQ9NTN9 838 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 ZCCHC3Q9NUD5 404 aaKnown RBP6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 ZMAT5Q9UDW3 170 aaKnown RBP6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 ING1Q9UK53 422 aaPredicted RBP6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 PPIEQ9UNP9 301 aaKnown RBP6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 IRAK3Q9Y616 596 aa6.69□□□□□ -1.34
CLSTN1-204ENST00000464286 A0A087WUU8 490 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 C2orf92A0A1B0GVN3 265 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 UNC119BA6NIH7 251 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 KIAA1324LA8MWY0 1029 aaPredicted RBP6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 UPK3BL1B0FP48 263 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 UPK3BL2E5RIL1 263 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 FAM227AF5H4B4 570 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 J3QRE1 110 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 M0R3H8 397 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 NDUFS4O43181 175 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 EMC8O43402 210 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 VEGFDO43915 354 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 FMO6PO60774 539 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 PRAMEF2O60811 474 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 CLEC3AO75596 197 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 RASGRP1O95267 797 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 MPC2O95563 127 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 HIST1H2ABP04908 130 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 IGFBP1P08833 259 aaPredicted RBP6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 CHRM5P08912 532 aaPredicted RBP6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 OR12D1P0DN82 309 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 CALCBP10092 127 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 ZNF3P17036 446 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 HMGA1P17096 107 aaKnown RBP6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 CXCL3P19876 107 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 THBS2P35442 1172 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 GDNFP39905 211 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 OMPP47874 163 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 MAP2K6P52564 334 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 CASP9P55211 416 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 MAZP56270 477 aaKnown RBP6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 VSX2P58304 361 aaPredicted RBP6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 MC1RQ01726 317 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 DBPQ10586 325 aaPredicted RBP6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 STX4Q12846 297 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 TMEM115Q12893 351 aaPredicted RBP6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 LMAN2Q12907 356 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 TSTA3Q13630 321 aaPredicted RBP6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 UBXN2BQ14CS0 331 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 PTPRRQ15256 657 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 IRF4Q15306 451 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 SF1Q15637 639 aaKnown RBP6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 KCNA10Q16322 511 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 ACSM3Q53FZ2 586 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 FAM46CQ5VWP2 391 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 LPCAT3Q6P1A2 487 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 NIPAL3Q6P499 406 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 RPL22L1Q6P5R6 122 aaKnown RBP6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 ZC3H14Q6PJT7 736 aaKnown RBP6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 ARL9Q6T311 187 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 GSG1LQ6UXU4 331 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 HTR3DQ70Z44 454 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 DPPA4Q7L190 304 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 HIST3H2AQ7L7L0 130 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 DCUN1D3Q8IWE4 304 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 SPAG16Q8N0X2 631 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms