RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 THBS1P07996 1170 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 ALOX5P09917 674 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 IFNA8P32881 189 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 ZNF136P52737 540 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 FUT7Q11130 342 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 GPR68Q15743 365 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 SNAPC1Q16533 368 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 MAPK14Q16539 360 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 RGS21Q2M5E4 152 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 ZNF404Q494X3 552 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 EIPR1Q53HC9 387 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 RNLSQ5VYX0 342 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 ZCCHC12Q6PEW1 402 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 CDRT4Q8N9R6 151 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 OR52I1Q8NGK6 324 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 PTPMT1Q8WUK0 201 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-205ENST00000464187 PIK3R3Q92569 461 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 LIN37Q96GY3 246 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-205ENST00000464187 COX4I2Q96KJ9 171 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 LRR1Q96L50 414 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 NXF2Q9GZY0 626 aaKnown RBP13.39□□□□□ -0.27
COL5A1-205ENST00000464187 SAP130Q9H0E3 1048 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 CACYBPQ9HB71 228 aaKnown RBP13.39□□□□□ -0.27
COL5A1-205ENST00000464187 HHATLQ9HCP6 504 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 C14orf105Q9NVL8 296 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 FBXO34Q9NWN3 711 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 ZNF232Q9UNY5 417 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 SATB2Q9UPW6 733 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 ERVK-19Q9WJR5 959 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 B3GALT1Q9Y5Z6 326 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 KLF4O43474 513 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 KIAA0513O60268 411 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 SCG5P05408 212 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 KLK3P07288 261 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-205ENST00000464187 FPR3P25089 353 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 ETV5P41161 510 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 RAB15P59190 212 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 DCAF12Q5T6F0 453 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 HES3Q5TGS1 186 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 SLC27A4Q6P1M0 643 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 PAQR6Q6TCH4 344 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 LSRQ86X29 649 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-205ENST00000464187 TMEM151BQ8IW70 566 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 NANOGP1Q8N7R0 232 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 COX18Q8N8Q8 333 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 POGLUT1Q8NBL1 392 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 PLPP5Q8NEB5 264 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 C7orf57Q8NEG2 295 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 TMEM163Q8TC26 289 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 TMEM255BQ8WV15 326 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 ZNF578Q96N58 590 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-205ENST00000464187 LRFN5Q96NI6 719 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 STACQ99469 402 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 MND1Q9BWT6 205 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 MMP27Q9H306 513 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 DUSP22Q9NRW4 184 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 RHBDL2Q9NX52 303 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 TESQ9UGI8 421 aaKnown RBP13.39□□□□□ -0.27
COL5A1-205ENST00000464187 CLCA3PQ9Y6N3 262 aa13.39□□□□□ -0.27
COL5A1-205ENST00000464187 PCNX2A6NKB5 2137 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 NPIPA5A0A0B4J1W7 369 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 PMS2P1A4D2B8 440 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 VSTM2BA6NLU5 285 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 A8MUA0 341 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 NPIPA7E9PJI5 369 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 RAB36O95755 333 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 JMJD7P0C870 316 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 OCM2P0CE71 109 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 OCMP0CE72 109 aaPredicted RBP13.38□□□□□ -0.27
COL5A1-205ENST00000464187 NPIPA8P0DM63 369 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 SOX3P41225 446 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 MAP3K8P41279 467 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 GPR4P46093 362 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 EMDP50402 254 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 PSMD7P51665 324 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 GAS1P54826 345 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 IFITM3Q01628 133 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 ELAVL1Q15717 326 aaKnown RBP13.38□□□□□ -0.27
COL5A1-205ENST00000464187 MBOAT2Q6ZWT7 520 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 SNX29P2Q8IUI4 249 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 NRMQ8IXM6 262 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 DEPDC7Q96QD5 511 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 CDADC1Q9BWV3 514 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 RACGAP1Q9H0H5 632 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 SLC26A1Q9H2B4 701 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 PISDQ9UG56 409 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 KCNE5Q9UJ90 142 aa13.38□□□□□ -0.27
COL5A1-205ENST00000464187 DIMT1Q9UNQ2 313 aaKnown RBP13.38□□□□□ -0.27
COL5A1-205ENST00000464187 ZFHX2Q9C0A1 2572 aaPredicted RBP13.37□□□□□ -0.27
COL5A1-205ENST00000464187 IDSB3KWA1 339 aa13.37□□□□□ -0.27
COL5A1-205ENST00000464187 PEX12O00623 359 aa13.37□□□□□ -0.27
COL5A1-205ENST00000464187 DYRK3O43781 588 aa13.37□□□□□ -0.27
COL5A1-205ENST00000464187 PRAMEF2O60811 474 aa13.37□□□□□ -0.27
COL5A1-205ENST00000464187 STX11O75558 287 aa13.37□□□□□ -0.27
COL5A1-205ENST00000464187 GPX5O75715 221 aa13.37□□□□□ -0.27
COL5A1-205ENST00000464187 DBIP07108 87 aaKnown RBP13.37□□□□□ -0.27
COL5A1-205ENST00000464187 PRG2P13727 222 aa13.37□□□□□ -0.27
COL5A1-205ENST00000464187 ENDOUP21128 410 aaKnown RBP13.37□□□□□ -0.27
COL5A1-205ENST00000464187 HTR2AP28223 471 aa13.37□□□□□ -0.27
COL5A1-205ENST00000464187 STAT5AP42229 794 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms