RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 FCRLAQ7L513 359 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 LRRC34Q8IZ02 419 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 GABRG1Q8N1C3 465 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 OR5D16Q8NGK9 328 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 OR5AK3PQ8NH89 298 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 MIPOL1Q8TD10 442 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 ZFP90Q8TF47 636 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 ABHD3Q8WU67 409 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 IGFBPL1Q8WX77 278 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 USB1Q9BQ65 265 aaKnown RBP12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 TMEM204Q9BSN7 226 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 SRXN1Q9BYN0 137 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 GSX2Q9BZM3 304 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 LAT2Q9GZY6 243 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 COQ10BQ9H8M1 238 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 AKTIPQ9H8T0 292 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 RAP2CQ9Y3L5 183 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 PRR14LQ5THK1 2151 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 PRSS51A0A1B0GVH4 220 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 SERINC4A6NH21 518 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 ESPNB1AK53 854 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 TM9SF1O15321 606 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 ITM2AO43736 263 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 SCN2BO60939 215 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 GCM2O75603 506 aaPredicted RBP12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 AGR2O95994 175 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 SOAT1P35610 550 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 RAC3P60763 192 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 P2RY6Q15077 328 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 QPRTQ15274 297 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 ARHGAP11BQ3KRB8 267 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 KRT71Q3SY84 523 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 PDZK1Q5T2W1 519 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 ANXA8L1Q5VT79 327 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 OR4F3Q6IEY1 312 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 HEPHL1Q6MZM0 1159 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 TFAP2EQ6VUC0 442 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 ZNF704Q6ZNC4 412 aaPredicted RBP12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 TUSC5Q8IXB3 177 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 ZNF614Q8N883 585 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 ZNF781Q8N8C0 355 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 ST8SIA1Q92185 356 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 COX4I2Q96KJ9 171 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 PKNOX2Q96KN3 472 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 BDH2Q9BUT1 245 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 ZNF350Q9GZX5 532 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 SERHL2Q9H4I8 314 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 C12orf49Q9H741 205 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 BCO1Q9HAY6 547 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 EXD2Q9NVH0 621 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 KCNE5Q9UJ90 142 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 HAO1Q9UJM8 370 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 PCDHGB4Q9UN71 923 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 CSPG4Q6UVK1 2322 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 ZANQ9Y493 2812 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 JMJD1CQ15652 2540 aa12.79□□□□□ -0.36
SNRNP40-203ENST00000463988 HEATR5AQ86XA9 2040 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 RNF103-CHMP3A0A140T963 221 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 RGS16O15492 202 aaPredicted RBP12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 FCMRO60667 390 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 DHRS4L1P0CG22 281 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 SLC7A1P30825 629 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 RNF144AP50876 292 aaPredicted RBP12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 RPL14P50914 215 aaKnown RBP12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 RPS26P62854 115 aaKnown RBP12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 LTBQ06643 244 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 ZNF844Q08AG5 666 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 SKP2Q13309 424 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 GPR68Q15743 365 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 CHI3L2Q15782 390 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 PDCD2Q16342 344 aaPredicted RBP12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 DPY19L1Q2PZI1 675 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 NDUFAF6Q330K2 333 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 SFRP5Q5T4F7 317 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 CLEC9AQ6UXN8 241 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 EIF3MQ7L2H7 374 aaKnown RBP12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 NUFIP2Q7Z417 695 aaKnown RBP12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 YTHDF3Q7Z739 585 aaKnown RBP12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 WFDC8Q8IUA0 241 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 CLECL1Q8IZS7 167 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 TMCO5AQ8N6Q1 288 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 ZNF611Q8N823 705 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 VPS37AQ8NEZ2 397 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 TMEM234Q8WY98 164 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 TESCQ96BS2 214 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 ZNF524Q96C55 264 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 PLPPR2Q96GM1 343 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 SLC35G5Q96KT7 338 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 SMR3AQ99954 134 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 DPY30Q9C005 99 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 POLE3Q9NRF9 147 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 KLHL9Q9P2J3 617 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 FREM1Q5H8C1 2179 aa12.78□□□□□ -0.36
SNRNP40-203ENST00000463988 USF3Q68DE3 2245 aa12.77□□□□□ -0.36
SNRNP40-203ENST00000463988 FN1P02751 2386 aaKnown RBP12.77□□□□□ -0.36
SNRNP40-203ENST00000463988 WDR91A4D1P6 747 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 HS3ST1O14792 307 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 ANKRD28O15084 1053 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 UGT2B17O75795 530 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 HEXAP06865 529 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms