RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 TP53P04637 393 aaPredicted RBP17.59■□□□□ 0.41
VARS-221ENST00000463184 FESP07332 822 aa17.59■□□□□ 0.41
VARS-221ENST00000463184 PRIM2P49643 509 aa17.59■□□□□ 0.41
VARS-221ENST00000463184 RPL14P50914 215 aaKnown RBP17.59■□□□□ 0.41
VARS-221ENST00000463184 POU6F2P78424 691 aaPredicted RBP17.59■□□□□ 0.41
VARS-221ENST00000463184 P2RY6Q15077 328 aa17.59■□□□□ 0.41
VARS-221ENST00000463184 TAB1Q15750 504 aa17.59■□□□□ 0.41
VARS-221ENST00000463184 CD226Q15762 336 aa17.59■□□□□ 0.41
VARS-221ENST00000463184 EXOSC6Q5RKV6 272 aaKnown RBP17.59■□□□□ 0.41
VARS-221ENST00000463184 NUFIP2Q7Z417 695 aaKnown RBP17.59■□□□□ 0.41
VARS-221ENST00000463184 DYDC1Q8WWB3 177 aa17.59■□□□□ 0.41
VARS-221ENST00000463184 KISS1RQ969F8 398 aaPredicted RBP17.59■□□□□ 0.41
VARS-221ENST00000463184 C16orf58Q96GQ5 468 aa17.59■□□□□ 0.41
VARS-221ENST00000463184 FCRL1Q96LA6 429 aa17.59■□□□□ 0.41
VARS-221ENST00000463184 KLHDC3Q9BQ90 382 aa17.59■□□□□ 0.41
VARS-221ENST00000463184 BTBD2Q9BX70 525 aa17.59■□□□□ 0.41
VARS-221ENST00000463184 ATRQ13535 2644 aa17.59■□□□□ 0.41
VARS-221ENST00000463184 ZNF195O14628 629 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 PIP5K1BO14986 540 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 TLX2O43763 284 aaPredicted RBP17.58■□□□□ 0.4
VARS-221ENST00000463184 ADAP00813 363 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 YES1P07947 543 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 LINC00032P0C843 101 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 SHC1P29353 583 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 FOXF1Q12946 379 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 PDE7AQ13946 482 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 TSC22D1Q15714 1073 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 ZNF672Q499Z4 452 aaPredicted RBP17.58■□□□□ 0.4
VARS-221ENST00000463184 Q6ZSR9 355 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 FCRLAQ7L513 359 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 DDIASQ8IXT1 998 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 ARFGAP2Q8N6H7 521 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 TSSK3Q96PN8 268 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 STACQ99469 402 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 SRXN1Q9BYN0 137 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 GIN1Q9NXP7 522 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 LIPT1Q9Y234 373 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 MAGED1Q9Y5V3 778 aaPredicted RBP17.58■□□□□ 0.4
VARS-221ENST00000463184 PTGDR2Q9Y5Y4 395 aa17.58■□□□□ 0.4
VARS-221ENST00000463184 A0A1W2PP18 115 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 EFNA2O43921 213 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 SDC1P18827 310 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 CDKN1AP38936 164 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 ZNF117Q03924 483 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 ITGADQ13349 1161 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 TMEM176BQ3YBM2 270 aaPredicted RBP17.57■□□□□ 0.4
VARS-221ENST00000463184 CCNJQ5T5M9 372 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 SLC43A2Q8N370 569 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 FBXO27Q8NI29 283 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 PIWIL2Q8TC59 973 aaKnown RBP17.57■□□□□ 0.4
VARS-221ENST00000463184 PHOSPHO1Q8TCT1 267 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 LRRC8CQ8TDW0 803 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 JADE3Q92613 823 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 NEUROG1Q92886 237 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 MTERF3Q96E29 417 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 POTEKPQ9BYX7 375 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 HOXD1Q9GZZ0 328 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 SLCO5A1Q9H2Y9 848 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 DUSP22Q9NRW4 184 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 TMED5Q9Y3A6 229 aa17.57■□□□□ 0.4
VARS-221ENST00000463184 GPC6Q9Y625 555 aaPredicted RBP17.57■□□□□ 0.4
VARS-221ENST00000463184 ANK3Q12955 4377 aaKnown RBP17.57■□□□□ 0.4
VARS-221ENST00000463184 SONP18583 2426 aaKnown RBP17.57■□□□□ 0.4
VARS-221ENST00000463184 CD5LO43866 347 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 SKAP2O75563 359 aaPredicted RBP17.56■□□□□ 0.4
VARS-221ENST00000463184 NTN1O95631 604 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 NUDT14O95848 222 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 IFNA2P01563 188 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 THBS1P07996 1170 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 DDX5P17844 614 aaKnown RBP17.56■□□□□ 0.4
VARS-221ENST00000463184 ACVR1BP36896 505 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 P2RX1P51575 399 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 SUMO3P55854 103 aaPredicted RBP17.56■□□□□ 0.4
VARS-221ENST00000463184 MLC1Q15049 377 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 PGGHGQ32M88 737 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 XKR7Q5GH72 579 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 HMBOX1Q6NT76 420 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 PODNL1Q6PEZ8 512 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 R3HCC1LQ7Z5L2 792 aaKnown RBP17.56■□□□□ 0.4
VARS-221ENST00000463184 ZNF619Q8N2I2 560 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 ZNF527Q8NB42 609 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 OR2T11Q8NH01 316 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 ZFP90Q8TF47 636 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 CKAP2Q8WWK9 683 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 FAM120BQ96EK7 910 aaKnown RBP17.56■□□□□ 0.4
VARS-221ENST00000463184 PIGUQ9H490 435 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 PNPOQ9NVS9 261 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 BAIAP2L1Q9UHR4 511 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 ABCA1O95477 2261 aa17.56■□□□□ 0.4
VARS-221ENST00000463184 H3BNH8 94 aa17.55■□□□□ 0.4
VARS-221ENST00000463184 HMGN2P05204 90 aaKnown RBP17.55■□□□□ 0.4
VARS-221ENST00000463184 ATP6V1C1P21283 382 aa17.55■□□□□ 0.4
VARS-221ENST00000463184 ASMTP46597 345 aa17.55■□□□□ 0.4
VARS-221ENST00000463184 RPL38P63173 70 aaKnown RBP17.55■□□□□ 0.4
VARS-221ENST00000463184 BSPH1Q075Z2 132 aa17.55■□□□□ 0.4
VARS-221ENST00000463184 RFTN2Q52LD8 501 aaPredicted RBP17.55■□□□□ 0.4
VARS-221ENST00000463184 KLHL26Q53HC5 615 aa17.55■□□□□ 0.4
VARS-221ENST00000463184 CBLN3Q6UW01 205 aa17.55■□□□□ 0.4
VARS-221ENST00000463184 DNM1P46Q6ZS02 220 aa17.55■□□□□ 0.4
VARS-221ENST00000463184 Q6ZT83 130 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms