RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 C20orf204Q6ZNR8 217 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 CXXC5Q7LFL8 322 aaKnown RBP7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 OLIG3Q7RTU3 272 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 ZNF550Q7Z398 422 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 C6orf120Q7Z4R8 191 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 MARCH3Q86UD3 253 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 GOLGA6L1Q8N7Z2 621 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 OR4K17Q8NGC6 315 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 OR4C3Q8NH37 302 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 MIPOL1Q8TD10 442 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 FIG4Q92562 907 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 MOAP1Q96BY2 351 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 NEURL3Q96EH8 262 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 NPAS1Q99742 590 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 INPP5KQ9BT40 448 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 GSX2Q9BZM3 304 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 DSN1Q9H410 356 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 SLC6A13Q9NSD5 602 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 ZIM2Q9NZV7 527 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 PPP4R1LQ9P1A2 415 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 NDRG3Q9UGV2 375 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 BTNL2Q9UIR0 455 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 DKKL1Q9UK85 242 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 CENPVL1A0A0U1RR11 272 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 A0A1W2PQD3 144 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 CASKO14936 926 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 UBDO15205 165 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 SMNDC1O75940 238 aaKnown RBP eCLIP7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 TGDSO95455 350 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 CPSF4O95639 269 aaKnown RBP7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 ANGPTL1O95841 491 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 THBDP07204 575 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 KRT16P08779 473 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 CD8BP10966 210 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 PAX1P15863 534 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 FPR1P21462 350 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 TBXA2RP21731 343 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 MATN1P21941 496 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 UQCRC2P22695 453 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 DPP4P27487 766 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 LCN1P31025 176 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 SMCPP49901 116 aaPredicted RBP7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 CASP9P55211 416 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 DSCR4P56555 118 aaPredicted RBP7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 EEF1A1P68104 462 aaKnown RBP7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 SIRPAP78324 504 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 PLAURQ03405 335 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 BCL2A1Q16548 175 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 ANXA8L1Q5VT79 327 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 EEF1A1P5Q5VTE0 462 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 OR2A2Q6IF42 318 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 HEPHL1Q6MZM0 1159 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 TNFAIP8L2Q6P589 184 aaPredicted RBP7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 FUNDC1Q8IVP5 155 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 UBQLNLQ8IYU4 475 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 CNEP1R1Q8N9A8 125 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 GATSQ8NAP1 163 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 GLB1L3Q8NCI6 653 aaPredicted RBP7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 ADAMTS15Q8TE58 950 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 DYDC1Q8WWB3 177 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 STON2Q8WXE9 905 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 C1GALT1C1Q96EU7 318 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 SDF2Q99470 211 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 MED18Q9BUE0 208 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 CCDC28BQ9BUN5 200 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 BDH2Q9BUT1 245 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 ZNF350Q9GZX5 532 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 OR51I1Q9H343 314 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 ZNF385DQ9H6B1 395 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 RNF122Q9H9V4 155 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 TCF7L2Q9NQB0 619 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 ZNF226Q9NYT6 803 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 MED11Q9P086 117 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 KCNE5Q9UJ90 142 aa7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 MRTO4Q9UKD2 239 aaKnown RBP7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 FAF1Q9UNN5 650 aaPredicted RBP7.1□□□□□ -1.27
CDC42BPA-210ENST00000462553 UQCRHLA0A096LP55 91 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 OR2M5A3KFT3 312 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 CCDC154A6NI56 674 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 SHISA8B8ZZ34 492 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 POLR3GO15318 223 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 KIAA0513O60268 411 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 EDF1O60869 148 aaKnown RBP7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 TNFRSF21O75509 655 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 SLC22A3O75751 556 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 SOX30O94993 753 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 CNOT4O95628 575 aaKnown RBP7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 GSNP06396 782 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 OR12D1P0DN82 309 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 PEPDP12955 493 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 POU2F1P14859 743 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 RNF144AP50876 292 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 MVDP53602 400 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 AQP5P55064 265 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 CLDN20P56880 219 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 GANABQ14697 944 aaKnown RBP7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 PLPPR5Q32ZL2 321 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 ARHGAP11BQ3KRB8 267 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 GTDC1Q4AE62 458 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 TIGD2Q4W5G0 525 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms