RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 NSD1Q96L73 2696 aaPredicted RBP13.68□□□□□ -0.22
SKA3-204ENST00000462482 CYP7B1O75881 506 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 SLU7O95391 586 aaKnown RBP13.67□□□□□ -0.22
SKA3-204ENST00000462482 AK1P00568 194 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 PRKCAP17252 672 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 ALDH3A1P30838 453 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 SERPINB5P36952 375 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 RASGEF1BQ0VAM2 473 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 MAD2L1Q13257 205 aaPredicted RBP13.67□□□□□ -0.22
SKA3-204ENST00000462482 QPRTQ15274 297 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 ZNF672Q499Z4 452 aaPredicted RBP13.67□□□□□ -0.22
SKA3-204ENST00000462482 IL23RQ5VWK5 629 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 C3orf33Q6P1S2 294 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 Q6ZT83 130 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 ZNF100Q8IYN0 542 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 PSMA8Q8TAA3 256 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 TMEM234Q8WY98 164 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 HS6ST2Q96MM7 605 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 OR5B2Q96R09 309 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 KLHDC3Q9BQ90 382 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 C1orf50Q9BV19 199 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 BHLHE41Q9C0J9 482 aaPredicted RBP13.67□□□□□ -0.22
SKA3-204ENST00000462482 CXorf36Q9H7Y0 433 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 BCO1Q9HAY6 547 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 BARX1Q9HBU1 254 aaPredicted RBP13.67□□□□□ -0.22
SKA3-204ENST00000462482 MKS1Q9NXB0 559 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 LIPT1Q9Y234 373 aa13.67□□□□□ -0.22
SKA3-204ENST00000462482 HIVEP2P31629 2446 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 IGHV3-15A0A0B4J1V0 119 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 RNF223E7ERA6 249 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 OIP5O43482 229 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 EFNA2O43921 213 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 CRLF1O75462 422 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 NTN1O95631 604 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 NID1P14543 1247 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 OR3A2P47893 321 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 CSNK2A1P68400 391 aaPredicted RBP13.66□□□□□ -0.22
SKA3-204ENST00000462482 BSPH1Q075Z2 132 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 IFFO1Q0D2I5 559 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 FAPQ12884 760 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 PTGR1Q14914 329 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 PPA1Q15181 289 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 TOMM34Q15785 309 aaPredicted RBP13.66□□□□□ -0.22
SKA3-204ENST00000462482 UGT3A2Q3SY77 523 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 RIBC1Q8N443 379 aaPredicted RBP13.66□□□□□ -0.22
SKA3-204ENST00000462482 PIWIL2Q8TC59 973 aaKnown RBP13.66□□□□□ -0.22
SKA3-204ENST00000462482 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.66□□□□□ -0.22
SKA3-204ENST00000462482 TUBGCP3Q96CW5 907 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 ZHX1-C8orf76Q96EF9 292 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 OR7D2Q96RA2 312 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 DUSP26Q9BV47 211 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 REG4Q9BYZ8 158 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 COQ10BQ9H8M1 238 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 EXD2Q9NVH0 621 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 GPATCH2Q9NW75 528 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 EMC3Q9P0I2 261 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 GIMAP2Q9UG22 337 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 PCDHGB4Q9UN71 923 aa13.66□□□□□ -0.22
SKA3-204ENST00000462482 SPIN1Q9Y657 262 aaPredicted RBP13.66□□□□□ -0.22
SKA3-204ENST00000462482 FN1P02751 2386 aaKnown RBP13.65□□□□□ -0.22
SKA3-204ENST00000462482 A0A1W2PNR3 127 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 SERINC4A6NH21 518 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 OVOL3O00110 214 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 STX11O75558 287 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 SKAP2O75563 359 aaPredicted RBP13.65□□□□□ -0.22
SKA3-204ENST00000462482 LYZL6O75951 148 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 SOD3P08294 240 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 DANCRP0C864 163 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 PGCP20142 388 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 CDKN1AP38936 164 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 GPR68Q15743 365 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 PGS1Q32NB8 556 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 NDUFAF6Q330K2 333 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 TIGD2Q4W5G0 525 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 XKR7Q5GH72 579 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 SLC25A53Q5H9E4 307 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 C6orf136Q5SQH8 315 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.65□□□□□ -0.22
SKA3-204ENST00000462482 PDZK1Q5T2W1 519 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 HEPHL1Q6MZM0 1159 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 EIF3MQ7L2H7 374 aaKnown RBP13.65□□□□□ -0.22
SKA3-204ENST00000462482 C16orf62Q7Z3J2 963 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 GALNT5Q7Z7M9 940 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 P2RY8Q86VZ1 359 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 KBTBD8Q8NFY9 601 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 OR5AK3PQ8NH89 298 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 OR2W6PQ8NHA6 318 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 SLC25A43Q8WUT9 341 aaPredicted RBP13.65□□□□□ -0.22
SKA3-204ENST00000462482 ST8SIA1Q92185 356 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 COQ8BQ96D53 544 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 MDFIQ99750 246 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 PSD2Q9BQI7 771 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 NMUR2Q9GZQ4 415 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 LAT2Q9GZY6 243 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 SLCO5A1Q9H2Y9 848 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 ANKZF1Q9H8Y5 726 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 CISD1Q9NZ45 108 aaKnown RBP13.65□□□□□ -0.22
SKA3-204ENST00000462482 MAGED1Q9Y5V3 778 aaPredicted RBP13.65□□□□□ -0.22
SKA3-204ENST00000462482 KCNE3Q9Y6H6 103 aa13.65□□□□□ -0.22
SKA3-204ENST00000462482 VPS13CQ709C8 3753 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms