RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 TMCO5AQ8N6Q1 288 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 KBTBD8Q8NFY9 601 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 OR5D16Q8NGK9 328 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 OR5AK3PQ8NH89 298 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 RFWD2Q8NHY2 731 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 FBXW5Q969U6 566 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 MRGPRX4Q96LA9 322 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 C3orf30Q96M34 536 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 POTEKPQ9BYX7 375 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 HOXD1Q9GZZ0 328 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 GP6Q9HCN6 339 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 SLC17A7Q9P2U7 560 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 MAGED1Q9Y5V3 778 aaPredicted RBP14.29□□□□□ -0.12
COL7A1-204ENST00000462475 SONP18583 2426 aaKnown RBP14.29□□□□□ -0.12
COL7A1-204ENST00000462475 RNF223E7ERA6 249 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 SLU7O95391 586 aaKnown RBP14.28□□□□□ -0.12
COL7A1-204ENST00000462475 H6PDO95479 791 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 YES1P07947 543 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 KRT16P08779 473 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 EDNRAP25101 427 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 SLC7A1P30825 629 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 CDKN1AP38936 164 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 CCR4P51679 360 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 RPS26P62854 115 aaKnown RBP14.28□□□□□ -0.12
COL7A1-204ENST00000462475 BSPH1Q075Z2 132 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 SELENBP1Q13228 472 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 QPRTQ15274 297 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 C6orf136Q5SQH8 315 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.28□□□□□ -0.12
COL7A1-204ENST00000462475 EIF1ADQ8N9N8 165 aaKnown RBP14.28□□□□□ -0.12
COL7A1-204ENST00000462475 OR2W6PQ8NHA6 318 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 SFXN5Q8TD22 340 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 SMAP2Q8WU79 429 aaPredicted RBP14.28□□□□□ -0.12
COL7A1-204ENST00000462475 HSD17B8Q92506 261 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 OR7D2Q96RA2 312 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 PSD2Q9BQI7 771 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 SERHL2Q9H4I8 314 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 ESRP2Q9H6T0 727 aaKnown RBP14.28□□□□□ -0.12
COL7A1-204ENST00000462475 BCO1Q9HAY6 547 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 ATAD3AQ9NVI7 634 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 PRSS50Q9UI38 385 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 DTNAQ9Y4J8 743 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 CUBNO60494 3623 aa14.28□□□□□ -0.12
COL7A1-204ENST00000462475 COL6A5A8TX70 2615 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 CENPVL1A0A0U1RR11 272 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 ESPNB1AK53 854 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 ETV2O00321 342 aaPredicted RBP14.27□□□□□ -0.13
COL7A1-204ENST00000462475 SMAD9O15198 467 aaKnown RBP14.27□□□□□ -0.13
COL7A1-204ENST00000462475 SKAP2O75563 359 aaPredicted RBP14.27□□□□□ -0.13
COL7A1-204ENST00000462475 LYPLA1O75608 230 aaPredicted RBP14.27□□□□□ -0.13
COL7A1-204ENST00000462475 LYZL6O75951 148 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 UBL4AP11441 157 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 SOAT1P35610 550 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 RAC3P60763 192 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 ITGADQ13349 1161 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 P2RY6Q15077 328 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 ZNF672Q499Z4 452 aaPredicted RBP14.27□□□□□ -0.13
COL7A1-204ENST00000462475 ATP6AP1LQ52LC2 224 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 SLC25A53Q5H9E4 307 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 PDZK1Q5T2W1 519 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 IL23RQ5VWK5 629 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 BHLHA15Q7RTS1 189 aaPredicted RBP14.27□□□□□ -0.13
COL7A1-204ENST00000462475 SLC43A2Q8N370 569 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 FNDC5Q8NAU1 212 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 OR5W2Q8NH69 310 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 PIWIL2Q8TC59 973 aaKnown RBP14.27□□□□□ -0.13
COL7A1-204ENST00000462475 GTPBP3Q969Y2 492 aaKnown RBP14.27□□□□□ -0.13
COL7A1-204ENST00000462475 COQ8BQ96D53 544 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 ZNF300Q96RE9 604 aaPredicted RBP14.27□□□□□ -0.13
COL7A1-204ENST00000462475 QRSL1Q9H0R6 528 aaKnown RBP14.27□□□□□ -0.13
COL7A1-204ENST00000462475 EML4Q9HC35 981 aaKnown RBP14.27□□□□□ -0.13
COL7A1-204ENST00000462475 NGBQ9NPG2 151 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 KLHL9Q9P2J3 617 aa14.27□□□□□ -0.13
COL7A1-204ENST00000462475 TLDC2A0PJX2 215 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 DPRXA6NFQ7 191 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 SERINC4A6NH21 518 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 C9JVG2 144 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 CFLARO15519 480 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 ZNF264O43296 627 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 EIF4E2O60573 245 aaKnown RBP14.26□□□□□ -0.13
COL7A1-204ENST00000462475 SPAG7O75391 227 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 CRLF1O75462 422 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 OR3A2P47893 321 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 HBA1P69905 142 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 DMTNQ08495 405 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 FAPQ12884 760 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 SKP2Q13309 424 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 CBFBQ13951 182 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 PGGHGQ32M88 737 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 LSM12Q3MHD2 195 aaKnown RBP14.26□□□□□ -0.13
COL7A1-204ENST00000462475 Q6ZT83 130 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 OLIG3Q7RTU3 272 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 RIMKLAQ8IXN7 391 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 TOR1AIP2Q8NFQ8 470 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 ZNF775Q96BV0 537 aaPredicted RBP14.26□□□□□ -0.13
COL7A1-204ENST00000462475 MOAP1Q96BY2 351 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 TRMT61AQ96FX7 289 aaKnown RBP14.26□□□□□ -0.13
COL7A1-204ENST00000462475 OR5B2Q96R09 309 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 SDF2Q99470 211 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 TRIM2Q9C040 744 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms