RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 HNRNPA1L2Q32P51 320 aaKnown RBP17.11■□□□□ 0.33
HPS3-204ENST00000462030 ADAMTSL4Q6UY14 1074 aa17.11■□□□□ 0.33
HPS3-204ENST00000462030 RTL4Q6ZR62 310 aa17.11■□□□□ 0.33
HPS3-204ENST00000462030 GET4Q7L5D6 327 aaPredicted RBP17.11■□□□□ 0.33
HPS3-204ENST00000462030 GPALPP1Q8IXQ4 340 aa17.11■□□□□ 0.33
HPS3-204ENST00000462030 LNX2Q8N448 690 aa17.11■□□□□ 0.33
HPS3-204ENST00000462030 CYB561A3Q8NBI2 242 aa17.11■□□□□ 0.33
HPS3-204ENST00000462030 OR13C2Q8NGS9 318 aa17.11■□□□□ 0.33
HPS3-204ENST00000462030 GHSRQ92847 366 aa17.11■□□□□ 0.33
HPS3-204ENST00000462030 PEX11GQ96HA9 241 aa17.11■□□□□ 0.33
HPS3-204ENST00000462030 MRPS30Q9NP92 439 aaKnown RBP17.11■□□□□ 0.33
HPS3-204ENST00000462030 BRD7Q9NPI1 651 aa17.11■□□□□ 0.33
HPS3-204ENST00000462030 KRCC1Q9NPI7 259 aaPredicted RBP17.11■□□□□ 0.33
HPS3-204ENST00000462030 MRPL15Q9P015 296 aaKnown RBP17.11■□□□□ 0.33
HPS3-204ENST00000462030 PRELID1Q9Y255 219 aa17.11■□□□□ 0.33
HPS3-204ENST00000462030 TRPM6Q9BX84 2022 aa17.11■□□□□ 0.33
HPS3-204ENST00000462030 MYO7AQ13402 2215 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 SYNDIG1LA6NDD5 238 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 TRABD2BA6NFA1 517 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 LRRN3E7EW58 273 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 CDK2AP1O14519 115 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 MAGEB4O15481 346 aaPredicted RBP17.1■□□□□ 0.33
HPS3-204ENST00000462030 GYPBP06028 91 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 SBK2P0C263 348 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 PEPDP12955 493 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 BMP7P18075 431 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 KLF9Q13886 244 aaPredicted RBP17.1■□□□□ 0.33
HPS3-204ENST00000462030 ZSWIM7Q19AV6 140 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 DMKNQ6E0U4 476 aaPredicted RBP17.1■□□□□ 0.33
HPS3-204ENST00000462030 MFSD12Q6NUT3 480 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 DGLUCYQ7Z3D6 616 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 ZNF527Q8NB42 609 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 OR2T35Q8NGX2 323 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 RPLP0P6Q8NHW5 317 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 POF1BQ8WVV4 589 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 COL26A1Q96A83 441 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 IFT27Q9BW83 186 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 LRRN3Q9H3W5 708 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 SCP2D1Q9UJQ7 156 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 ZNF780BQ9Y6R6 833 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 SLC22A31A6NKX4 558 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 HYAL3O43820 417 aaPredicted RBP17.1■□□□□ 0.33
HPS3-204ENST00000462030 RAB28P51157 221 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 SNTB2Q13425 540 aaKnown RBP17.1■□□□□ 0.33
HPS3-204ENST00000462030 CAMK1Q14012 370 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 GPR68Q15743 365 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 FGD2Q7Z6J4 655 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 CACUL1Q86Y37 369 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 SPRTNQ9H040 489 aaPredicted RBP17.1■□□□□ 0.33
HPS3-204ENST00000462030 C20orf85Q9H1P6 137 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 METTL17Q9H7H0 456 aaPredicted RBP17.1■□□□□ 0.33
HPS3-204ENST00000462030 CMC2Q9NRP2 79 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 INPP5EQ9NRR6 644 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 CLDND1Q9NY35 253 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 FLVCR2Q9UPI3 526 aa17.1■□□□□ 0.33
HPS3-204ENST00000462030 SCN2AQ99250 2005 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 HIDE1A8MVS5 230 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 PPM1AP35813 382 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 SNRPNP63162 240 aaKnown RBP17.09■□□□□ 0.33
HPS3-204ENST00000462030 CEBPEQ15744 281 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 MAPK14Q16539 360 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 SLC44A3Q8N4M1 653 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 TOR1AIP2Q8NFQ8 470 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 DOK4Q8TEW6 326 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 TMEM239Q8WW34 195 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 SMPDL3BQ92485 455 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 GCDHQ92947 438 aaPredicted RBP17.09■□□□□ 0.33
HPS3-204ENST00000462030 KCMF1Q9P0J7 381 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 NPFFR2Q9Y5X5 522 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 A8MUA0 341 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 HRGP04196 525 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 EPXP11678 715 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 P2RY2P41231 377 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 HCCSP53701 268 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 TAS2R43P59537 309 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 EEF1A1P68104 462 aaKnown RBP17.09■□□□□ 0.33
HPS3-204ENST00000462030 PITPNAQ00169 270 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 RPL6Q02878 288 aaKnown RBP17.09■□□□□ 0.33
HPS3-204ENST00000462030 ELAVL3Q14576 367 aaKnown RBP17.09■□□□□ 0.33
HPS3-204ENST00000462030 HSD17B12Q53GQ0 312 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 FAAH2Q6GMR7 532 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 NLRC3Q7RTR2 1065 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 FTMTQ8N4E7 242 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 RAB42Q8N4Z0 105 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 WFIKKN2Q8TEU8 576 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 OTUB2Q96DC9 234 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 ZNF436Q9C0F3 470 aaPredicted RBP17.09■□□□□ 0.33
HPS3-204ENST00000462030 MTHFD2LQ9H903 347 aaPredicted RBP17.09■□□□□ 0.33
HPS3-204ENST00000462030 ST6GALNAC2Q9UJ37 374 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 OR1A2Q9Y585 309 aa17.09■□□□□ 0.33
HPS3-204ENST00000462030 TRAV27A0A087WT01 109 aa17.08■□□□□ 0.33
HPS3-204ENST00000462030 EDDM13A0A1B0GTR0 161 aa17.08■□□□□ 0.33
HPS3-204ENST00000462030 TRAPPC13A5PLN9 417 aa17.08■□□□□ 0.33
HPS3-204ENST00000462030 FAM86C2PA6NEL3 165 aa17.08■□□□□ 0.33
HPS3-204ENST00000462030 IGLON5A6NGN9 336 aa17.08■□□□□ 0.33
HPS3-204ENST00000462030 ADRB1P08588 477 aa17.08■□□□□ 0.33
HPS3-204ENST00000462030 RRASP10301 218 aa17.08■□□□□ 0.33
HPS3-204ENST00000462030 UGT2B7P16662 529 aa17.08■□□□□ 0.33
HPS3-204ENST00000462030 RAG2P55895 527 aa17.08■□□□□ 0.33
HPS3-204ENST00000462030 NRG3P56975 720 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms