RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 RFWD2Q8NHY2 731 aa16.92■□□□□ 0.3
VARS-220ENST00000461874 RNF128Q8TEB7 428 aa16.92■□□□□ 0.3
VARS-220ENST00000461874 CPNE4Q96A23 557 aaPredicted RBP16.92■□□□□ 0.3
VARS-220ENST00000461874 PIK3IP1Q96FE7 263 aa16.92■□□□□ 0.3
VARS-220ENST00000461874 ZC3HAV1LQ96H79 300 aaKnown RBP16.92■□□□□ 0.3
VARS-220ENST00000461874 SRXN1Q9BYN0 137 aa16.92■□□□□ 0.3
VARS-220ENST00000461874 LAT2Q9GZY6 243 aa16.92■□□□□ 0.3
VARS-220ENST00000461874 EXD2Q9NVH0 621 aa16.92■□□□□ 0.3
VARS-220ENST00000461874 MKLN1Q9UL63 735 aa16.92■□□□□ 0.3
VARS-220ENST00000461874 CENPVL1A0A0U1RR11 272 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 DNAJA2O60884 412 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 UGT2B17O75795 530 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 AGR2O95994 175 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 GUSBP08236 651 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 OR12D1P0DN82 309 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 AGTR1P30556 359 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 FOXD4Q12950 439 aaPredicted RBP16.91■□□□□ 0.3
VARS-220ENST00000461874 SKP2Q13309 424 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 CBFBQ13951 182 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 QPRTQ15274 297 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 AP1ARQ63HQ0 302 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 SAXO2Q658L1 398 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 STAC2Q6ZMT1 411 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 BEND4Q6ZU67 534 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 OLIG3Q7RTU3 272 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 TMCO5AQ8N6Q1 288 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 ATP6V1C2Q8NEY4 427 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 ABHD3Q8WU67 409 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 XAGE5Q8WWM1 108 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 REXO5Q96IC2 774 aaKnown RBP16.91■□□□□ 0.3
VARS-220ENST00000461874 COQ10BQ9H8M1 238 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 BEX4Q9NWD9 120 aaPredicted RBP16.91■□□□□ 0.3
VARS-220ENST00000461874 VPS13CQ709C8 3753 aa16.91■□□□□ 0.3
VARS-220ENST00000461874 ROS1P08922 2347 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 TMEM120BA0PK00 339 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 E9PBE3 544 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 SDHDO14521 159 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 THBDP07204 575 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 ALDOCP09972 364 aaKnown RBP16.9■□□□□ 0.3
VARS-220ENST00000461874 PPP3CBP16298 524 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 LOXP28300 417 aaPredicted RBP16.9■□□□□ 0.3
VARS-220ENST00000461874 S100A3P33764 101 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 CCR4P51679 360 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 SELENBP1Q13228 472 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 RNPS1Q15287 305 aaKnown RBP16.9■□□□□ 0.3
VARS-220ENST00000461874 FAM174BQ3ZCQ3 159 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 ATAD3BQ5T9A4 648 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 TNFAIP8L2Q6P589 184 aaPredicted RBP16.9■□□□□ 0.3
VARS-220ENST00000461874 EIF3MQ7L2H7 374 aaKnown RBP16.9■□□□□ 0.3
VARS-220ENST00000461874 STK32CQ86UX6 486 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 ZFP90Q8TF47 636 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 RAB8BQ92930 207 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 NEURL3Q96EH8 262 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 TEX37Q96LM6 180 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 CCDC115Q96NT0 180 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 THUMPD3Q9BV44 507 aaKnown RBP16.9■□□□□ 0.3
VARS-220ENST00000461874 FANCFQ9NPI8 374 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 POLE3Q9NRF9 147 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 THAP1Q9NVV9 213 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 BTNL2Q9UIR0 455 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 FLNAP21333 2647 aaKnown RBP16.9■□□□□ 0.3
VARS-220ENST00000461874 NF1P21359 2839 aa16.9■□□□□ 0.3
VARS-220ENST00000461874 KIAA0513O60268 411 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 SNNO75324 88 aaPredicted RBP16.89■□□□□ 0.29
VARS-220ENST00000461874 CYP7B1O75881 506 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 CSTAP01040 98 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 HOXC12P31275 282 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 NME5P56597 212 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 UFM1P61960 85 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 MAPK14Q16539 360 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 TIGD2Q4W5G0 525 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 TYW3Q6IPR3 259 aaKnown RBP16.89■□□□□ 0.29
VARS-220ENST00000461874 FCRLAQ7L513 359 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 SPATA19Q7Z5L4 167 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 CXorf67Q86X51 503 aaPredicted RBP16.89■□□□□ 0.29
VARS-220ENST00000461874 OIT3Q8WWZ8 545 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 ST8SIA1Q92185 356 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 ROPN1LQ96C74 230 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 HS3ST6Q96QI5 342 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 SLC35A5Q9BS91 424 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 SAP130Q9H0E3 1048 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 C12orf49Q9H741 205 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 GP6Q9HCN6 339 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 DLL4Q9NR61 685 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 AIG1Q9NVV5 245 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 KLHL13Q9P2N7 655 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 WDR45Q9Y484 360 aa16.89■□□□□ 0.29
VARS-220ENST00000461874 HDAC3O15379 428 aa16.88■□□□□ 0.29
VARS-220ENST00000461874 PRKD3O94806 890 aa16.88■□□□□ 0.29
VARS-220ENST00000461874 UBTFL6P0CB48 400 aaPredicted RBP16.88■□□□□ 0.29
VARS-220ENST00000461874 ENPP1P22413 925 aa16.88■□□□□ 0.29
VARS-220ENST00000461874 SLC7A1P30825 629 aa16.88■□□□□ 0.29
VARS-220ENST00000461874 CHI3L1P36222 383 aaPredicted RBP16.88■□□□□ 0.29
VARS-220ENST00000461874 KHKP50053 298 aa16.88■□□□□ 0.29
VARS-220ENST00000461874 SLC18A1P54219 525 aa16.88■□□□□ 0.29
VARS-220ENST00000461874 SESN3P58005 492 aa16.88■□□□□ 0.29
VARS-220ENST00000461874 RAC3P60763 192 aa16.88■□□□□ 0.29
VARS-220ENST00000461874 FUT5Q11128 374 aa16.88■□□□□ 0.29
VARS-220ENST00000461874 TMEM201Q5SNT2 666 aa16.88■□□□□ 0.29
VARS-220ENST00000461874 TUSC5Q8IXB3 177 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms