RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 ADAM29Q9UKF5 820 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 SLC35A3Q9Y2D2 325 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 A8MUA0 341 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 SYT5O00445 386 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 SLC22A5O76082 557 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 UCHL1P09936 223 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 CEBPBP17676 345 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 CLDN20P56880 219 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 EXOSC7Q15024 291 aaKnown RBP13.47□□□□□ -0.25
NCL-207ENST00000461347 FAM198BQ6UWH4 519 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 ZNF227Q86WZ6 799 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 SGTBQ96EQ0 304 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 NRTNQ99748 197 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 MED17Q9NVC6 651 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 SAGE1Q9NXZ1 904 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 DNMT3BQ9UBC3 853 aaKnown RBP13.47□□□□□ -0.25
NCL-207ENST00000461347 UPB1Q9UBR1 384 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 PLEKHB1Q9UF11 243 aaPredicted RBP13.47□□□□□ -0.25
NCL-207ENST00000461347 NOP16Q9Y3C1 178 aaKnown RBP13.47□□□□□ -0.25
NCL-207ENST00000461347 A0A1W2PR48 441 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 OR14I1A6ND48 311 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 HIDE1A8MVS5 230 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 RENP00797 406 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 LIMS3P0CW19 117 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 LIMS4P0CW20 117 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 GNALP38405 381 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 GDNFP39905 211 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 POU4F2Q12837 409 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 HYAL4Q2M3T9 481 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 FAM111BQ6SJ93 734 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 CCDC36Q8IYA8 594 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 ADGRF3Q8IZF5 1079 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 JAGN1Q8N5M9 183 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 ANKRD53Q8N9V6 530 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 ELP4Q96EB1 424 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 OR2M4Q96R27 311 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 MIXL1Q9H2W2 232 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 ISG20L2Q9H9L3 353 aaKnown RBP13.47□□□□□ -0.25
NCL-207ENST00000461347 SLC23A2Q9UGH3 650 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 FARSAQ9Y285 508 aaKnown RBP13.47□□□□□ -0.25
NCL-207ENST00000461347 PSMA3P25788 255 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 CST6Q15828 149 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 MPEG1Q2M385 716 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 PRAMEF17Q5VTA0 474 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 METTL11BQ5VVY1 283 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 TMEM150AQ86TG1 271 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 TOR1AIP2Q8NFQ8 470 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 OR56B4Q8NH76 319 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 TRIM2Q9C040 744 aa13.47□□□□□ -0.25
NCL-207ENST00000461347 KAT7O95251 611 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 VAMP1P23763 118 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 ART1P52961 327 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 DUSP6Q16828 381 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 BAIAP2L2Q6UXY1 529 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 TPRA1Q86W33 373 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 LGALS14Q8TCE9 139 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 RIT1Q92963 219 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 SPACA7Q96KW9 195 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 NXF2Q9GZY0 626 aaKnown RBP13.46□□□□□ -0.25
NCL-207ENST00000461347 CDCP1Q9H5V8 836 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 NYNRINQ9P2P1 1898 aaKnown RBP13.46□□□□□ -0.25
NCL-207ENST00000461347 A0A0A6YYJ9 748 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 LRIT2A6NDA9 550 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 MAGEB4O15481 346 aaPredicted RBP13.46□□□□□ -0.25
NCL-207ENST00000461347 SOD1P00441 154 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 GDI1P31150 447 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 BCL6P41182 706 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 FCRLAQ7L513 359 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 AMER3Q8N944 861 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 C15orf40Q8WUR7 153 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 ZFPM2Q8WW38 1151 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 TRPV4Q9HBA0 871 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 FGF20Q9NP95 211 aaPredicted RBP13.46□□□□□ -0.25
NCL-207ENST00000461347 REV1Q9UBZ9 1251 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 MAFFQ9ULX9 164 aa13.46□□□□□ -0.25
NCL-207ENST00000461347 LRRC37A2A6NM11 1700 aa13.46□□□□□ -0.26
NCL-207ENST00000461347 A0A0B4J203 849 aa13.46□□□□□ -0.26
NCL-207ENST00000461347 SERTM1A2A2V5 107 aa13.46□□□□□ -0.26
NCL-207ENST00000461347 OR6C74A6NCV1 312 aa13.46□□□□□ -0.26
NCL-207ENST00000461347 NDUFB2O95178 105 aa13.46□□□□□ -0.26
NCL-207ENST00000461347 MAPK3P27361 379 aaPredicted RBP13.46□□□□□ -0.26
NCL-207ENST00000461347 DECR1Q16698 335 aa13.46□□□□□ -0.26
NCL-207ENST00000461347 DCST2Q5T1A1 773 aa13.46□□□□□ -0.26
NCL-207ENST00000461347 ZNF776Q68DI1 518 aaPredicted RBP13.46□□□□□ -0.26
NCL-207ENST00000461347 ABHD17CQ6PCB6 329 aa13.46□□□□□ -0.26
NCL-207ENST00000461347 APOOLQ6UXV4 268 aa13.46□□□□□ -0.26
NCL-207ENST00000461347 ZNF620Q6ZNG0 422 aa13.46□□□□□ -0.26
NCL-207ENST00000461347 TCTE3Q8IZS6 198 aa13.46□□□□□ -0.26
NCL-207ENST00000461347 ZNF619Q8N2I2 560 aa13.46□□□□□ -0.26
NCL-207ENST00000461347 OR4D11Q8NGI4 311 aa13.46□□□□□ -0.26
NCL-207ENST00000461347 ATF6BQ99941 703 aa13.46□□□□□ -0.26
NCL-207ENST00000461347 VN1R3Q9BXE9 311 aa13.46□□□□□ -0.26
NCL-207ENST00000461347 SLC25A19Q9HC21 320 aa13.46□□□□□ -0.26
NCL-207ENST00000461347 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.46□□□□□ -0.26
NCL-207ENST00000461347 FBXL3Q9UKT7 428 aa13.46□□□□□ -0.26
NCL-207ENST00000461347 STON1Q9Y6Q2 735 aa13.46□□□□□ -0.26
NCL-207ENST00000461347 MYOFQ9NZM1 2061 aa13.45□□□□□ -0.26
NCL-207ENST00000461347 CACNA1IQ9P0X4 2223 aa13.45□□□□□ -0.26
NCL-207ENST00000461347 KANTRA0A1W2PQU2 76 aa13.45□□□□□ -0.26
NCL-207ENST00000461347 UBL3O95164 117 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms