RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 LAT2Q9GZY6 243 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 QRSL1Q9H0R6 528 aaKnown RBP13.83□□□□□ -0.2
VARS-219ENST00000461328 SLC6A13Q9NSD5 602 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 GALNT8Q9NY28 637 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 P2RX2Q9UBL9 471 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 KCNE5Q9UJ90 142 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 DCTN4Q9UJW0 460 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 MCTS1Q9ULC4 181 aaKnown RBP13.83□□□□□ -0.2
VARS-219ENST00000461328 SLC35A3Q9Y2D2 325 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 TMEM247A6NEH6 219 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 GJE1A6NN92 205 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 EDF1O60869 148 aaKnown RBP13.82□□□□□ -0.2
VARS-219ENST00000461328 CTAG2O75638 210 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 SMNDC1O75940 238 aaKnown RBP eCLIP13.82□□□□□ -0.24e-7■■■□□ 17.2
VARS-219ENST00000461328 PLGP00747 810 aaPredicted RBP13.82□□□□□ -0.2
VARS-219ENST00000461328 CRHP06850 196 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 CHRM4P08173 479 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 ZCCHC18P0CG32 403 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 ETFAP13804 333 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 NCF2P19878 526 aaPredicted RBP13.82□□□□□ -0.2
VARS-219ENST00000461328 CPOXP36551 454 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 MRPL19P49406 292 aaKnown RBP13.82□□□□□ -0.2
VARS-219ENST00000461328 DSTNP60981 165 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 CHRNEQ04844 493 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 SKP2Q13309 424 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 FGFBP1Q14512 234 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 TOMM34Q15785 309 aaPredicted RBP13.82□□□□□ -0.2
VARS-219ENST00000461328 MAPK14Q16539 360 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 AGKQ53H12 422 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 FBXW10Q5XX13 1052 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 HBMQ6B0K9 141 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 ESPNLQ6ZVH7 1005 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 LILRA2Q8N149 483 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 ARFGAP2Q8N6H7 521 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 OR2V1Q8NHB1 315 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 GPR119Q8TDV5 335 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 OIT3Q8WWZ8 545 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 SPDL1Q96EA4 605 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 ARSGQ96EG1 525 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 MRGPRX4Q96LA9 322 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 KLHL15Q96M94 604 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 THUMPD3Q9BV44 507 aaKnown RBP13.82□□□□□ -0.2
VARS-219ENST00000461328 TPT1P8Q9HAU6 139 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 CACYBPQ9HB71 228 aaKnown RBP13.82□□□□□ -0.2
VARS-219ENST00000461328 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.82□□□□□ -0.2
VARS-219ENST00000461328 ZNF446Q9NWS9 450 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 PAQR5Q9NXK6 330 aaPredicted RBP13.82□□□□□ -0.2
VARS-219ENST00000461328 TRIM33Q9UPN9 1127 aa13.82□□□□□ -0.2
VARS-219ENST00000461328 CSMD2Q7Z408 3487 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 A0A0G2JND7 137 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 A6NNC1 897 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 CXCL13O43927 109 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 TNFSF13O75888 250 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 BCHEP06276 602 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 GUSBP08236 651 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 PRKCAP17252 672 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 PGCP20142 388 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 IL11P20809 199 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 PSMA4P25789 261 aaKnown RBP13.81□□□□□ -0.2
VARS-219ENST00000461328 ADH6P28332 368 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 MAGEA8P43361 318 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 ATP4BP51164 291 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 IRX1P78414 480 aaPredicted RBP13.81□□□□□ -0.2
VARS-219ENST00000461328 SELENBP1Q13228 472 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 GNA13Q14344 377 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 LRRC74BQ6ZQY2 392 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 ZNF563Q8TA94 476 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 LINC01560Q8TB33 94 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 WDR60Q8WVS4 1066 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 TMEM234Q8WY98 164 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 NRGNQ92686 78 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 GTF2H4Q92759 462 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 SAP130Q9H0E3 1048 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 CLEC4MQ9H2X3 399 aaPredicted RBP13.81□□□□□ -0.2
VARS-219ENST00000461328 RAD21L1Q9H4I0 556 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 RABEP2Q9H5N1 569 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 RASSF1Q9NS23 344 aa13.81□□□□□ -0.2
VARS-219ENST00000461328 ANKRD17O75179 2603 aaKnown RBP13.81□□□□□ -0.2
VARS-219ENST00000461328 ANKHD1Q8IWZ3 2542 aaKnown RBP13.81□□□□□ -0.2
VARS-219ENST00000461328 CSMD1Q96PZ7 3565 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 A0A096LPI6 279 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 A0A0J9YW62 118 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 PRAMEF27A3QJZ7 478 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 A8MXE2 369 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 MSTNO14793 375 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 AQP8O94778 261 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 EPXP11678 715 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 SHC1P29353 583 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 SLC7A1P30825 629 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 RYKP34925 604 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 CRISP3P54108 245 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 KCNJ10P78508 379 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 DAZAP2Q15038 168 aaPredicted RBP13.8□□□□□ -0.2
VARS-219ENST00000461328 TMEM176BQ3YBM2 270 aaPredicted RBP13.8□□□□□ -0.2
VARS-219ENST00000461328 BLOC1S3Q6QNY0 202 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 PEX5LQ8IYB4 626 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 ST8SIA1Q92185 356 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 REXO5Q96IC2 774 aaKnown RBP13.8□□□□□ -0.2
VARS-219ENST00000461328 SIKE1Q9BRV8 207 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms