RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 QPRTQ15274 297 aa20.2■□□□□ 0.82
TRAF4-207ENST00000461195 PDSS1Q5T2R2 415 aa20.2■□□□□ 0.82
TRAF4-207ENST00000461195 LRRC74BQ6ZQY2 392 aa20.2■□□□□ 0.82
TRAF4-207ENST00000461195 KIF18BQ86Y91 864 aa20.2■□□□□ 0.82
TRAF4-207ENST00000461195 CNEP1R1Q8N9A8 125 aa20.2■□□□□ 0.82
TRAF4-207ENST00000461195 OR2V1Q8NHB1 315 aa20.2■□□□□ 0.82
TRAF4-207ENST00000461195 STON2Q8WXE9 905 aa20.2■□□□□ 0.82
TRAF4-207ENST00000461195 GTF2H4Q92759 462 aa20.2■□□□□ 0.82
TRAF4-207ENST00000461195 ZG16BQ96DA0 208 aa20.2■□□□□ 0.82
TRAF4-207ENST00000461195 LURAP1Q96LR2 239 aa20.2■□□□□ 0.82
TRAF4-207ENST00000461195 KLHL15Q96M94 604 aa20.2■□□□□ 0.82
TRAF4-207ENST00000461195 THUMPD3Q9BV44 507 aaKnown RBP20.2■□□□□ 0.82
TRAF4-207ENST00000461195 PRRG4Q9BZD6 226 aa20.2■□□□□ 0.82
TRAF4-207ENST00000461195 SLC38A1Q9H2H9 487 aa20.2■□□□□ 0.82
TRAF4-207ENST00000461195 TPT1P8Q9HAU6 139 aa20.2■□□□□ 0.82
TRAF4-207ENST00000461195 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.2■□□□□ 0.82
TRAF4-207ENST00000461195 ZNF446Q9NWS9 450 aa20.2■□□□□ 0.82
TRAF4-207ENST00000461195 PDZD2O15018 2839 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 A0A0J9YW62 118 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 GJE1A6NN92 205 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 DNAJA2O60884 412 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 NTN1O95631 604 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 CHRM4P08173 479 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 SFTPDP35247 375 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 PGM1P36871 562 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 CPA2P48052 419 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 ATP4BP51164 291 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 GTDC1Q4AE62 458 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 SLC25A53Q5H9E4 307 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 HBMQ6B0K9 141 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 PPP4R4Q6NUP7 873 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 SLC2A7Q6PXP3 512 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 LUZP2Q86TE4 346 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 FUNDC1Q8IVP5 155 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 FAM71CQ8NEG0 241 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 RBM24Q9BX46 236 aaKnown RBP20.19■□□□□ 0.82
TRAF4-207ENST00000461195 CCDC167Q9P0B6 97 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 P2RX2Q9UBL9 471 aa20.19■□□□□ 0.82
TRAF4-207ENST00000461195 MCTS1Q9ULC4 181 aaKnown RBP20.19■□□□□ 0.82
TRAF4-207ENST00000461195 ETV2O00321 342 aaPredicted RBP20.18■□□□□ 0.82
TRAF4-207ENST00000461195 EFNA2O43921 213 aa20.18■□□□□ 0.82
TRAF4-207ENST00000461195 CXCL13O43927 109 aa20.18■□□□□ 0.82
TRAF4-207ENST00000461195 EDF1O60869 148 aaKnown RBP20.18■□□□□ 0.82
TRAF4-207ENST00000461195 AQP8O94778 261 aa20.18■□□□□ 0.82
TRAF4-207ENST00000461195 SYNGR4O95473 234 aa20.18■□□□□ 0.82
TRAF4-207ENST00000461195 PGCP20142 388 aa20.18■□□□□ 0.82
TRAF4-207ENST00000461195 CRATP43155 626 aa20.18■□□□□ 0.82
TRAF4-207ENST00000461195 KIR2DL2P43627 348 aaPredicted RBP20.18■□□□□ 0.82
TRAF4-207ENST00000461195 MVDP53602 400 aa20.18■□□□□ 0.82
TRAF4-207ENST00000461195 KCNJ10P78508 379 aa20.18■□□□□ 0.82
TRAF4-207ENST00000461195 SORDQ00796 357 aa20.18■□□□□ 0.82
TRAF4-207ENST00000461195 BLOC1S3Q6QNY0 202 aa20.18■□□□□ 0.82
TRAF4-207ENST00000461195 HMGN2P46Q86SG4 172 aa20.18■□□□□ 0.82
TRAF4-207ENST00000461195 TMEM234Q8WY98 164 aa20.18■□□□□ 0.82
TRAF4-207ENST00000461195 ST8SIA1Q92185 356 aa20.18■□□□□ 0.82
TRAF4-207ENST00000461195 PMM1Q92871 262 aa20.18■□□□□ 0.82
TRAF4-207ENST00000461195 ZNF524Q96C55 264 aa20.18■□□□□ 0.82
TRAF4-207ENST00000461195 STARD4Q96DR4 205 aa20.18■□□□□ 0.82
TRAF4-207ENST00000461195 THOC1Q96FV9 657 aaKnown RBP20.18■□□□□ 0.82
TRAF4-207ENST00000461195 PAIP1Q9H074 479 aaKnown RBP20.18■□□□□ 0.82
TRAF4-207ENST00000461195 QRSL1Q9H0R6 528 aaKnown RBP20.18■□□□□ 0.82
TRAF4-207ENST00000461195 MTHFD2LQ9H903 347 aaPredicted RBP20.18■□□□□ 0.82
TRAF4-207ENST00000461195 TMEM45AQ9NWC5 275 aa20.18■□□□□ 0.82
TRAF4-207ENST00000461195 AGAP5A6NIR3 686 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 A8MXE2 369 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 NR5A2O00482 541 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 MSTNO14793 375 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 ETFAP13804 333 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 SHC1P29353 583 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 SLC6A8P48029 635 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 CARD18P57730 90 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 DSTNP60981 165 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 SIRPAP78324 504 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 SELENBP1Q13228 472 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 SQLEQ14534 574 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 VWA1Q6PCB0 445 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 ZZZ3Q8IYH5 903 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 OSTF1Q92882 214 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 SPDL1Q96EA4 605 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 AURKBQ96GD4 344 aaPredicted RBP20.17■□□□□ 0.82
TRAF4-207ENST00000461195 TIGARQ9NQ88 270 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 THUMPD1Q9NXG2 353 aaKnown RBP20.17■□□□□ 0.82
TRAF4-207ENST00000461195 GALNT8Q9NY28 637 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 CRIM1Q9NZV1 1036 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 PCDHB14Q9Y5E9 798 aa20.17■□□□□ 0.82
TRAF4-207ENST00000461195 A0A096LPI6 279 aa20.16■□□□□ 0.82
TRAF4-207ENST00000461195 BCAS1O75363 584 aaPredicted RBP20.16■□□□□ 0.82
TRAF4-207ENST00000461195 SMNDC1O75940 238 aaKnown RBP eCLIP20.16■□□□□ 0.823e-7■■■■□ 24.8
TRAF4-207ENST00000461195 CAPN3P20807 821 aa20.16■□□□□ 0.82
TRAF4-207ENST00000461195 KRTAP10-9P60411 292 aa20.16■□□□□ 0.82
TRAF4-207ENST00000461195 GNA13Q14344 377 aa20.16■□□□□ 0.82
TRAF4-207ENST00000461195 TMEM176BQ3YBM2 270 aaPredicted RBP20.16■□□□□ 0.82
TRAF4-207ENST00000461195 AGKQ53H12 422 aa20.16■□□□□ 0.82
TRAF4-207ENST00000461195 BTLAQ7Z6A9 289 aa20.16■□□□□ 0.82
TRAF4-207ENST00000461195 CMIPQ8IY22 773 aa20.16■□□□□ 0.82
TRAF4-207ENST00000461195 ARFGAP2Q8N6H7 521 aa20.16■□□□□ 0.82
TRAF4-207ENST00000461195 ATP6V1C2Q8NEY4 427 aa20.16■□□□□ 0.82
TRAF4-207ENST00000461195 FAM222BQ8WU58 562 aa20.16■□□□□ 0.82
TRAF4-207ENST00000461195 SIKE1Q9BRV8 207 aa20.16■□□□□ 0.82
TRAF4-207ENST00000461195 RAD21L1Q9H4I0 556 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms