RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 ZFP37Q9Y6Q3 630 aaPredicted RBP2.98□□□□□ -1.93
SSX2IP-204ENST00000459708 NLRC5Q86WI3 1866 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 LOC105371242A0A075B767 164 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 SHISA7A6NL88 538 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 YJEFN3A6XGL0 299 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 TCP11X1B4DZS4 312 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 TRIM49D1C9J1S8 452 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 E9PAM4 449 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 MFSD11O43934 449 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 PLOD3O60568 738 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 PLIN3O60664 434 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 CYTIPO60759 359 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 TM7SF2O76062 418 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 SHBGP04278 402 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 TPBGLP0DKB5 382 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 RALBP11234 206 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 NQO1P15559 274 aaKnown RBP2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 IL1RNP18510 177 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 EPORP19235 508 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 EEF1DP29692 281 aaKnown RBP2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 RPA3P35244 121 aaPredicted RBP2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 SFTPDP35247 375 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 HMGCLP35914 325 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 PTGER3P43115 390 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 RGS4P49798 205 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 HNMTP50135 292 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 NPY4RP50391 375 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 PKNOX1P55347 436 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 AP1S2P56377 157 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 MAP3K7CLP57077 242 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 ABCE1P61221 599 aaKnown RBP2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 SLC7A9P82251 487 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 DHODHQ02127 395 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 GBE1Q04446 702 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 AP1B1Q10567 949 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 ABRQ12979 859 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 BNIP2Q12982 314 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 STX3Q13277 289 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 RCN2Q14257 317 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 ZNF235Q14590 738 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 ZNF273Q14593 569 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 TAF1AQ15573 450 aaPredicted RBP2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 RBBP7Q16576 425 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 CDO1Q16878 200 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 ANKRD20A4Q4UJ75 823 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 HECTD3Q5T447 861 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 ATP1A1-AS1Q5TC04 95 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 SEL1L3Q68CR1 1132 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 CASC4Q6P4E1 433 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 CXCL17Q6UXB2 119 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 ZYG11AQ6WRX3 759 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 LINC00299Q6ZSB3 139 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 RAPH1Q70E73 1250 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 FAM131BQ86XD5 332 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 ZFAND4Q86XD8 727 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 CTAGE3PQ8IX95 158 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 APCDD1Q8J025 514 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 PACRGLQ8N7B6 248 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 Q8NFD4 153 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 UBA3Q8TBC4 463 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 STAG3L4Q8TBR4 150 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 C10orf82Q8WW14 230 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 STMN2Q93045 179 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 PSMG2Q969U7 264 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 MCUR1Q96AQ8 359 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 ULK4Q96C45 1275 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 DUS3LQ96G46 650 aaKnown RBP2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 MSANTD3Q96H12 275 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 PPP1R16AQ96I34 528 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 ZNF514Q96K75 400 aaPredicted RBP2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 CNDP2Q96KP4 475 aaKnown RBP2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 ZNF641Q96N77 438 aaPredicted RBP2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 RDH12Q96NR8 316 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 SH3GL1Q99961 368 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 HOPXQ9BPY8 73 aaPredicted RBP2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 TBL1YQ9BQ87 522 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 RAB11FIP5Q9BXF6 653 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 DERL2Q9GZP9 239 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 OR10A4Q9H209 315 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 PARLQ9H300 379 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 RNPEPL1Q9HAU8 725 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 FAM49BQ9NUQ9 324 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 DNAJC17Q9NVM6 304 aaKnown RBP2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 CHCHD3Q9NX63 227 aaKnown RBP2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 PKD2L2Q9NZM6 624 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 C6orf203Q9P0P8 240 aaPredicted RBP2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 STX18Q9P2W9 335 aaKnown RBP2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 THAP10Q9P2Z0 257 aaPredicted RBP2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 HMGXB4Q9UGU5 601 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 PCSK1NQ9UHG2 260 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 NEU3Q9UQ49 428 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 CHMP2BQ9UQN3 213 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 TMED5Q9Y3A6 229 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 GMEB1Q9Y692 573 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 LTBP2Q14767 1821 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 NOTCH2Q04721 2471 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 SCN1AP35498 2009 aa2.97□□□□□ -1.93
SSX2IP-204ENST00000459708 TRIP11Q15643 1979 aa2.96□□□□□ -1.94
SSX2IP-204ENST00000459708 CHD5Q8TDI0 1954 aa2.96□□□□□ -1.94
SSX2IP-204ENST00000459708 A0A087WZ39 114 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms