RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 MRPL2Q5T653 305 aaKnown RBP16.4■□□□□ 0.22
PTPN6-204ENST00000456013 PAQR7Q86WK9 346 aa16.4■□□□□ 0.22
PTPN6-204ENST00000456013 TIGD4Q8IY51 512 aa16.4■□□□□ 0.22
PTPN6-204ENST00000456013 MS4A15Q8N5U1 240 aa16.4■□□□□ 0.22
PTPN6-204ENST00000456013 ADAMTS14Q8WXS8 1223 aa16.4■□□□□ 0.22
PTPN6-204ENST00000456013 SLC35A3Q9Y2D2 325 aa16.4■□□□□ 0.22
PTPN6-204ENST00000456013 CDHR4A6H8M9 788 aa16.39■□□□□ 0.21
PTPN6-204ENST00000456013 LINC00862A6NCI5 91 aa16.39■□□□□ 0.21
PTPN6-204ENST00000456013 HYAL3O43820 417 aaPredicted RBP16.39■□□□□ 0.21
PTPN6-204ENST00000456013 SLC22A5O76082 557 aa16.39■□□□□ 0.21
PTPN6-204ENST00000456013 PEPDP12955 493 aa16.39■□□□□ 0.21
PTPN6-204ENST00000456013 POU3F3P20264 500 aaPredicted RBP16.39■□□□□ 0.21
PTPN6-204ENST00000456013 NOS3P29474 1203 aa16.39■□□□□ 0.21
PTPN6-204ENST00000456013 ACVR1BP36896 505 aa16.39■□□□□ 0.21
PTPN6-204ENST00000456013 PITPNAQ00169 270 aa16.39■□□□□ 0.21
PTPN6-204ENST00000456013 IKZF1Q13422 519 aa16.39■□□□□ 0.21
PTPN6-204ENST00000456013 OR13C2Q8NGS9 318 aa16.39■□□□□ 0.21
PTPN6-204ENST00000456013 HAVCR2Q8TDQ0 301 aa16.39■□□□□ 0.21
PTPN6-204ENST00000456013 SMPDL3BQ92485 455 aa16.39■□□□□ 0.21
PTPN6-204ENST00000456013 MARVELD3Q96A59 401 aa16.39■□□□□ 0.21
PTPN6-204ENST00000456013 BPIFA2Q96DR5 249 aa16.39■□□□□ 0.21
PTPN6-204ENST00000456013 HAO2Q9NYQ3 351 aa16.39■□□□□ 0.21
PTPN6-204ENST00000456013 KCMF1Q9P0J7 381 aa16.39■□□□□ 0.21
PTPN6-204ENST00000456013 RNF215Q9Y6U7 377 aa16.39■□□□□ 0.21
PTPN6-204ENST00000456013 TBC1D3EA0A087X179 549 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 TRAV1-2A0A0B4J238 106 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 FMO6PO60774 539 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 TPOP07202 933 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 CD3GP09693 182 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 NID1P14543 1247 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 GIFP27352 417 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 BMP8BP34820 402 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 AP2S1P53680 142 aaPredicted RBP16.38■□□□□ 0.21
PTPN6-204ENST00000456013 RAG2P55895 527 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 RGS1Q08116 209 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 RPTNQ6XPR3 784 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 DGLUCYQ7Z3D6 616 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 BMP8AQ7Z5Y6 402 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 SIAH3Q8IW03 269 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 BMPERQ8N8U9 685 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 OR11H4Q8NGC9 324 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 SLC2A12Q8TD20 617 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 CACNG6Q9BXT2 260 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 KIR3DX1Q9H7L2 352 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 ABRACLQ9P1F3 81 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 SLC17A4Q9Y2C5 497 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 RIIAD1A6NNX1 92 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 SHOXO15266 292 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 STX11O75558 287 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 RAF1P04049 648 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 RPS15AP62244 130 aaKnown RBP16.38■□□□□ 0.21
PTPN6-204ENST00000456013 SNRPNP63162 240 aaKnown RBP16.38■□□□□ 0.21
PTPN6-204ENST00000456013 ACTC1P68032 377 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 ACTA1P68133 377 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 CAMK1Q14012 370 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 CST6Q15828 149 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 FAM78AQ5JUQ0 283 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 LUZP2Q86TE4 346 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 ZNF680Q8NEM1 530 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 NT5CQ8TCD5 201 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 GHSRQ92847 366 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 C7orf50Q9BRJ6 194 aaKnown RBP16.38■□□□□ 0.21
PTPN6-204ENST00000456013 ZCCHC4Q9H5U6 513 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 SERGEFQ9UGK8 458 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 ST6GALNAC2Q9UJ37 374 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 MOSPD1Q9UJG1 213 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 MED31Q9Y3C7 131 aa16.38■□□□□ 0.21
PTPN6-204ENST00000456013 PTP4A3O75365 173 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 CLUP10909 449 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 LAMP2P13473 410 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 CXCL3P19876 107 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 DGCR2P98153 550 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 AMZ1Q400G9 498 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 EXOSC6Q5RKV6 272 aaKnown RBP16.37■□□□□ 0.21
PTPN6-204ENST00000456013 DCST2Q5T1A1 773 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 USP53Q70EK8 1073 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 OR4N5Q8IXE1 308 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 OR5J2Q8NH18 312 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 OR4C6Q8NH72 309 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 HGDQ93099 445 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 KCNE5Q9UJ90 142 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 C19orf53Q9UNZ5 99 aaPredicted RBP16.37■□□□□ 0.21
PTPN6-204ENST00000456013 AUP1Q9Y679 476 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 SCN2AQ99250 2005 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 SERPINA3P01011 423 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 SAGP10523 405 aaPredicted RBP16.37■□□□□ 0.21
PTPN6-204ENST00000456013 PYCR1P32322 319 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 CRMP1Q14194 572 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 PDGFRLQ15198 375 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 COL28A1Q2UY09 1125 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 TRMT12Q53H54 448 aaKnown RBP16.37■□□□□ 0.21
PTPN6-204ENST00000456013 FCRLBQ6BAA4 426 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 FAAH2Q6GMR7 532 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 HEXA-AS1Q9H8Q6 139 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 SATB2Q9UPW6 733 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 BAIAP2Q9UQB8 552 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 STON1Q9Y6Q2 735 aa16.37■□□□□ 0.21
PTPN6-204ENST00000456013 LOC105369274A0A096LPK9 316 aa16.36■□□□□ 0.21
PTPN6-204ENST00000456013 CPMP14384 443 aa16.36■□□□□ 0.21
PTPN6-204ENST00000456013 ZNF3P17036 446 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms