RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 ZNF540Q8NDQ6 660 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 TMEM163Q8TC26 289 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 HAVCR2Q8TDQ0 301 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 CNOT9Q92600 299 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 RORBQ92753 470 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 GPX7Q96SL4 187 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 COPS4Q9BT78 406 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 ADAM19Q9H013 955 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 QRSL1Q9H0R6 528 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 GPN2Q9H9Y4 310 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 CPNE5Q9HCH3 593 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 FGF20Q9NP95 211 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 INPP5EQ9NRR6 644 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 ZNF226Q9NYT6 803 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 CTSFQ9UBX1 484 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 KLHL21Q9UJP4 597 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 PADI1Q9ULC6 663 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 ZDBF2Q9HCK1 2354 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 ENO4A6NNW6 628 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 ZNF99A8MXY4 864 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 EFCAB9A8MZ26 197 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 KDM4EB2RXH2 506 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 CDX4O14627 284 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 PLD2O14939 933 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 PRODHO43272 600 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 REM1O75628 298 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 DLGAP3O95886 979 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 IFNGP01579 166 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 CYP4B1P13584 511 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 ATP6V1B1P15313 513 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 PCMT1P22061 227 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 ABCD3P28288 659 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 SLC6A6P31641 620 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 POLR2IP36954 125 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 CLK1P49759 484 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 P2RX1P51575 399 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 FOXK2Q01167 660 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 POU4F2Q12837 409 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 PPP1R8Q12972 351 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 CBFBQ13951 182 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 IRF3Q14653 427 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 GINS1Q14691 196 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 SSPNQ14714 243 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 ALG10BQ5I7T1 473 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 EMC4Q5J8M3 183 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 C1orf189Q5VU69 101 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 JMJD6Q6NYC1 403 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 SMARCD3Q6STE5 483 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 OPN5Q6U736 354 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 C6orf15Q6UXA7 325 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 ZNF367Q7RTV3 350 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 ANKRD13BQ86YJ7 626 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 CCDC71Q8IV32 467 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 ERI1Q8IV48 349 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 NRMQ8IXM6 262 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 METTL27Q8N6F8 245 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 APCDD1LQ8NCL9 501 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 SIMC1Q8NDZ2 872 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 BPIFB6Q8NFQ5 453 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 OR5W2Q8NH69 310 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 STK35Q8TDR2 534 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 ELP5Q8TE02 316 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 APH1BQ8WW43 257 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 FGF11Q92914 225 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 BPIFA2Q96DR5 249 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 OMA1Q96E52 524 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 SNX18Q96RF0 628 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 TBL1XR1Q9BZK7 514 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 SPRY4Q9C004 299 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 OCIAD1Q9NX40 245 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 RHCGQ9UBD6 479 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 ZNF337Q9Y3M9 751 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 NPFFR2Q9Y5X5 522 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 CEPT1Q9Y6K0 416 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 A0A087WZY1 265 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 HRKO00198 91 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 TNFRSF10AO00220 468 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 TP53I11O14683 189 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 ARPC3O15145 178 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 NDUFB5O43674 189 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 MAN1A2O60476 641 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 PTP4A3O75365 173 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 CLIC3O95833 236 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 FBXO45P0C2W1 286 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 TSPAN19P0C672 248 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 PTGER1P34995 402 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 FOLR3P41439 243 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 IDH2P48735 452 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 CHAF1BQ13112 559 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 IL10RAQ13651 578 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 PGGHGQ32M88 737 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 TIMM50Q3ZCQ8 353 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 SLC25A53Q5H9E4 307 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 C3orf38Q5JPI3 329 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 NXNL2Q5VZ03 156 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 XAF1Q6GPH4 301 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 SLC30A6Q6NXT4 461 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 ARHGAP11AQ6P4F7 1023 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms