RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 MRPS14O60783 128 aaKnown RBP11.1□□□□□ -0.63
SMPD4-213ENST00000454468 ZIC2O95409 532 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-213ENST00000454468 LALBAP00709 142 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 HLA-DPB1P04440 258 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 RNH1P13489 461 aaKnown RBP11.1□□□□□ -0.63
SMPD4-213ENST00000454468 LIMS1P48059 325 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 FBXW4P57775 412 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 KRR1Q13601 381 aaKnown RBP11.1□□□□□ -0.63
SMPD4-213ENST00000454468 ZNF181Q2M3W8 571 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 C12orf73Q69YU5 71 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 VASH1Q7L8A9 365 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-213ENST00000454468 GLCCI1Q86VQ1 547 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 FAM26EQ8N5C1 309 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 AP3S1Q92572 193 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 DIO2Q92813 273 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 PIGUQ9H490 435 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 B3GNT3Q9Y2A9 372 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 CDH10Q9Y6N8 788 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 TRANK1O15050 2925 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 H7C1C5 153 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 KCNJ13O60928 360 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 PLGP00747 810 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-213ENST00000454468 STAT5AP42229 794 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 SOX2P48431 317 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 LCN6P62502 163 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 MLLT11Q13015 90 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-213ENST00000454468 HTR4Q13639 388 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 CLPPQ16740 277 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-213ENST00000454468 TUBA3EQ6PEY2 450 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 MBOAT2Q6ZWT7 520 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 GPR135Q8IZ08 494 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 Q8N402 240 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 OR13C5Q8NGS8 318 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 TTYH2Q9BSA4 534 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 HCAR1Q9BXC0 346 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 BARHL1Q9BZE3 327 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 EXOSC1Q9Y3B2 195 aaKnown RBP11.1□□□□□ -0.63
SMPD4-213ENST00000454468 A0A1B0GWA3 101 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 CPED1A4D0V7 1026 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 ELOA3DA6NLF2 546 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-213ENST00000454468 AQP9O43315 295 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 RAD1O60671 282 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 PROS1P07225 676 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 ZNF3P17036 446 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 MYL9P24844 172 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 RPS27P42677 84 aaKnown RBP11.1□□□□□ -0.63
SMPD4-213ENST00000454468 EMDP50402 254 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 ERVK-25P63136 954 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 RAB40BQ12829 278 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 ADAM15Q13444 863 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 QPRTQ15274 297 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 ZSWIM7Q19AV6 140 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 ELOA3BQ3SY89 546 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 CNIH2Q6PI25 160 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 THSD4Q6ZMP0 1018 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 RASSF6Q6ZTQ3 369 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 ELOA3Q8NG57 546 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 PIGKQ92643 395 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 NECTIN4Q96NY8 510 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 LMF1Q96S06 567 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 ADOQ96SZ5 270 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 BTBD2Q9BX70 525 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 FOXQ1Q9C009 403 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 NLKQ9UBE8 527 aa11.1□□□□□ -0.63
SMPD4-213ENST00000454468 DIMT1Q9UNQ2 313 aaKnown RBP11.1□□□□□ -0.63
SMPD4-213ENST00000454468 DPM1O60762 260 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 CPNE3O75131 537 aaKnown RBP11.09□□□□□ -0.63
SMPD4-213ENST00000454468 PAHP00439 452 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 IL7P13232 177 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 PRKACBP22694 351 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 BIKQ13323 160 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 C4orf36Q96KX1 117 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 CCDC86Q9H6F5 360 aaKnown RBP11.09□□□□□ -0.63
SMPD4-213ENST00000454468 MKKSQ9NPJ1 570 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-213ENST00000454468 MRPL15Q9P015 296 aaKnown RBP11.09□□□□□ -0.63
SMPD4-213ENST00000454468 EXTL2Q9UBQ6 330 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 ZNF670-ZNF695F2Z2N8 137 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 DYRK3O43781 588 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 IDH3BO43837 385 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 IFNGP01579 166 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 F13BP05160 661 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 TGM1P22735 817 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 SHC1P29353 583 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 PRKAR1BP31321 381 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 UGT2B10P36537 528 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 CRYBB2P43320 205 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 CTBP2P56545 445 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 OR12D2P58182 307 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 SMAD2Q15796 467 aaKnown RBP11.09□□□□□ -0.63
SMPD4-213ENST00000454468 ZNF620Q6ZNG0 422 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 ABI3BPQ7Z7G0 1075 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 ATCAYQ86WG3 371 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 IZUMO1Q8IYV9 350 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 SLC22A18ASQ8N1D0 253 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 SIRT6Q8N6T7 355 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 SLC37A3Q8NCC5 494 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 BAHD1Q8TBE0 780 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-213ENST00000454468 OMA1Q96E52 524 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 HSPA12BQ96MM6 686 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 NDC1Q9BTX1 674 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms