RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 CARTPTQ16568 116 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 C8orf82Q6P1X6 216 aaPredicted RBP7.21□□□□□ -1.26
BRCC3-208ENST00000453705 PRMT9Q6P2P2 845 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 VITQ6UXI7 678 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 SIGLEC15Q6ZMC9 328 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 PGAP1Q75T13 922 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 PTAR1Q7Z6K3 402 aaPredicted RBP7.21□□□□□ -1.26
BRCC3-208ENST00000453705 SHISA5Q8N114 240 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 C9orf43Q8TAL5 461 aaPredicted RBP7.21□□□□□ -1.26
BRCC3-208ENST00000453705 CNOT9Q92600 299 aaKnown RBP7.21□□□□□ -1.26
BRCC3-208ENST00000453705 CREB3L1Q96BA8 519 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 MRPS26Q9BYN8 205 aaKnown RBP7.21□□□□□ -1.26
BRCC3-208ENST00000453705 RANGRFQ9HD47 186 aaPredicted RBP7.21□□□□□ -1.26
BRCC3-208ENST00000453705 GIN1Q9NXP7 522 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 ABCD2Q9UBJ2 740 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 ZDHHC2Q9UIJ5 367 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 GNPTGQ9UJJ9 305 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 HIDE1A8MVS5 230 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 M0QYG6 137 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 TRIM24O15164 1050 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 C1QTNF9P0C862 333 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 ENO3P13929 434 aaPredicted RBP7.2□□□□□ -1.26
BRCC3-208ENST00000453705 GFAPP14136 432 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 PPP3CBP16298 524 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 ACRV1P26436 265 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 CD70P32970 193 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 CFHR2P36980 270 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 FEN1P39748 380 aaKnown RBP7.2□□□□□ -1.26
BRCC3-208ENST00000453705 IST1P53990 364 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 TESK1Q15569 626 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 DUSP6Q16828 381 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 PTCHD3Q3KNS1 767 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 ZIK1Q3SY52 487 aaPredicted RBP7.2□□□□□ -1.26
BRCC3-208ENST00000453705 FIGLAQ6QHK4 219 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 DCDC5Q6ZRR9 648 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 SYT9Q86SS6 491 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 HIPK1Q86Z02 1210 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 TMEM126BQ8IUX1 230 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 ZDHHC23Q8IYP9 409 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 ADGRG5Q8IZF4 528 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 MAPK15Q8TD08 544 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 CDK15Q96Q40 435 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 SLC30A3Q99726 388 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 ELOVL6Q9H5J4 265 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 RANBP3Q9H6Z4 567 aaPredicted RBP7.2□□□□□ -1.26
BRCC3-208ENST00000453705 RNF115Q9Y4L5 304 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 ASB4Q9Y574 426 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 TSSC4Q9Y5U2 329 aaPredicted RBP7.2□□□□□ -1.26
BRCC3-208ENST00000453705 SAC3D1A6NKF1 404 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 BBIP1A8MTZ0 92 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 MID1O15344 667 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 MED6O75586 246 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 SRP72O76094 671 aaKnown RBP7.2□□□□□ -1.26
BRCC3-208ENST00000453705 THBS4P35443 961 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 EEFSECP57772 596 aaKnown RBP7.2□□□□□ -1.26
BRCC3-208ENST00000453705 POLR2LP62875 67 aaKnown RBP7.2□□□□□ -1.26
BRCC3-208ENST00000453705 MTAPQ13126 283 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 NAE1Q13564 534 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 ARHGEF7Q14155 803 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 EIF4HQ15056 248 aaKnown RBP7.2□□□□□ -1.26
BRCC3-208ENST00000453705 XKR7Q5GH72 579 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 DCAF12L2Q5VW00 463 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 LARP4Q71RC2 724 aaKnown RBP eCLIP7.2□□□□□ -1.26
BRCC3-208ENST00000453705 RRM2BQ7LG56 351 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 DNAAF1Q8NEP3 725 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 OR4C15Q8NGM1 316 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 OR13C9Q8NGT0 318 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 ASB11Q8WXH4 323 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 OTUB1Q96FW1 271 aaPredicted RBP7.2□□□□□ -1.26
BRCC3-208ENST00000453705 TOE1Q96GM8 510 aaKnown RBP7.2□□□□□ -1.26
BRCC3-208ENST00000453705 COQ10AQ96MF6 247 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 ZNF382Q96SR6 550 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 WRAP53Q9BUR4 548 aaKnown RBP7.2□□□□□ -1.26
BRCC3-208ENST00000453705 WDR76Q9H967 626 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 ZBTB26Q9HCK0 441 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 ARMC1Q9NVT9 282 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 ASIC5Q9NY37 505 aa7.2□□□□□ -1.26
BRCC3-208ENST00000453705 NDRG2Q9UN36 371 aaKnown RBP7.2□□□□□ -1.26
BRCC3-208ENST00000453705 LOC102723971A0A1B0GUV8 181 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 CCSO14618 274 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 GYG2O15488 501 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 FKBP6O75344 327 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 NR2F6P10588 404 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 SLC2A1P11166 492 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 COX4I1P13073 169 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 NFATC2Q13469 925 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 TEAD2Q15562 447 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 OR4D1Q15615 310 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 PHKG1Q16816 387 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 PPP1R3AQ16821 1122 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 GPRC6AQ5T6X5 926 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.19□□□□□ -1.26
BRCC3-208ENST00000453705 PIANPQ8IYJ0 282 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 TDHQ8IZJ6 230 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 CHPT1Q8WUD6 406 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 ZNF480Q8WV37 535 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 GTPBP3Q969Y2 492 aaKnown RBP7.19□□□□□ -1.26
BRCC3-208ENST00000453705 FUBP1Q96AE4 644 aaKnown RBP7.19□□□□□ -1.26
BRCC3-208ENST00000453705 HS3ST6Q96QI5 342 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 BDH2Q9BUT1 245 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms