RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	CXCR6	O00574	342 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	SMAD7	O15105	426 aa	Known RBP	7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	LSM1	O15116	133 aa	Known RBP	7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	EIF4E2	O60573	245 aa	Known RBP	7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	SCEL	O95171	688 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	CST1	P01037	141 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	ENTPD1	P49961	510 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	P2RX1	P51575	399 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	MCCD1	P59942	119 aa	Predicted RBP	7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	DLG1	Q12959	904 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	TUBA3C	Q13748	450 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	TERF2	Q15554	542 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	TTC23	Q5W5X9	447 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	TUBA3E	Q6PEY2	450 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	LAS2	Q8IYD9	372 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	GALNT4	Q8N4A0	578 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	CPEB3	Q8NE35	698 aa	Known RBP	7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	NUBPL	Q8TB37	319 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	SFXN5	Q8TD22	340 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	ROBO4	Q8WZ75	1007 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	TP53INP1	Q96A56	240 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	SPSB2	Q99619	263 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	ASCL3	Q9NQ33	180 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	IKZF3	Q9UKT9	509 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	C19orf53	Q9UNZ5	99 aa	Predicted RBP	7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	TMED7	Q9Y3B3	224 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	GAPDHS	O14556	408 aa	Predicted RBP	7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	ICOSLG	O75144	302 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	PRKD3	O94806	890 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	GLS	O94925	669 aa	Predicted RBP	7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	ANXA2	P07355	339 aa	Known RBP	7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	HSF1	Q00613	529 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	MELK	Q14680	651 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	LRRC36	Q1X8D7	754 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	TRPM8	Q7Z2W7	1104 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	NET1	Q7Z628	596 aa	Predicted RBP	7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	GOLM1	Q8NBJ4	401 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	CPNE4	Q96A23	557 aa	Predicted RBP	7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	C10orf90	Q96M02	699 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	OSBPL10	Q9BXB5	764 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	SLITRK2	Q9H156	845 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	ADAM21	Q9UKJ8	722 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	RAB21	Q9UL25	225 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	IGHV1-45	A0A0A0MS14	117 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	SMPD2	O60906	423 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	PDE5A	O76074	875 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	ETHE1	O95571	254 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	FABP3	P05413	133 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	SRD5A2	P31213	254 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	BNIP2	Q12982	314 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	TIGD6	Q17RP2	521 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	MAGEE2	Q8TD90	523 aa	Predicted RBP	7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	ST7L	Q8TDW4	575 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	NRBF2	Q96F24	287 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	TTTY12	Q9BZ98	90 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	DNAJB11	Q9UBS4	358 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	FRG2C	A6NGY1	282 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	AGAP14	A8MT82	685 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	LCAT	P04180	440 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	CCL3	P10147	92 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	TBXA2R	P21731	343 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	F8A1	P23610	371 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	SLC6A6	P31641	620 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	TNFSF10	P50591	281 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	FABP6	P51161	128 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	NUDT6	P53370	316 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	PCBD1	P61457	104 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	RELA	Q04206	551 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	SCGB2A2	Q13296	93 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	CARM1	Q86X55	608 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	RELL1	Q8IUW5	271 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	CACTIN-AS1	Q8N1I8	211 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	OR5L1	Q8NGL2	311 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	COPS4	Q9BT78	406 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	CCDC134	Q9H6E4	229 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	HAO1	Q9UJM8	370 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	MIA3	Q5JRA6	1907 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	FRS3	O43559	492 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	FOXS1	O43638	330 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	TIMM8A	O60220	97 aa	Predicted RBP	7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	VAMP5	O95183	116 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	CLDN14	O95500	239 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	FOXA1	P55317	472 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	PIGF	Q07326	219 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	SQSTM1	Q13501	440 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	PTGES3	Q15185	160 aa	Known RBP	7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	PPP1R3A	Q16821	1122 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	SLC36A2	Q495M3	483 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	NHSL2	Q5HYW2	709 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	ADNP2	Q6IQ32	1131 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	MFSD12	Q6NUT3	480 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	ESPNL	Q6ZVH7	1005 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	MRPL21	Q7Z2W9	205 aa	Known RBP	7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	GRINA	Q7Z429	371 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	OR11L1	Q8NGX0	322 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	ZDHHC16	Q969W1	377 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	POLR2J3	Q9H1A7	115 aa	Known RBP	7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	GSTO2	Q9H4Y5	243 aa		7.75	□□□□□ -1.17
HCG18-238	ENST00000449544	OBP2B	Q9NPH6	170 aa		7.75	□□□□□ -1.17

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