RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 DSN1Q9H410 356 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 PRORYQ9H606 182 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 STX18Q9P2W9 335 aaKnown RBP12.79□□□□□ -0.36
SHMT2-203ENST00000449049 DNAJB9Q9UBS3 223 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 ZMIZ1Q9ULJ6 1067 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 EML6Q6ZMW3 1958 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 PINLYPA6NC86 204 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 LRRC3CA6NJW4 275 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 CPSF4LA6NMK7 179 aaKnown RBP12.79□□□□□ -0.36
SHMT2-203ENST00000449049 GNB5O14775 395 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 CLOCKO15516 846 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 PEX1O43933 1283 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 DEAF1O75398 565 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-203ENST00000449049 OR5F1O95221 314 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 LINGO3P0C6S8 592 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 ANPEPP15144 967 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 MASP1P48740 699 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 FOXO1Q12778 655 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 ZNF613Q6PF04 617 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 PLEKHM3Q6ZWE6 761 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 OFCC1Q8IZS5 231 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 PQLC1Q8N2U9 271 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 ZADH2Q8N4Q0 377 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 TMEM178AQ8NBL3 297 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 PIK3C3Q8NEB9 887 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 ZNF524Q96C55 264 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 RNPEPL1Q9HAU8 725 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 TMEM27Q9HBJ8 222 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 TUBA8Q9NY65 449 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-203ENST00000449049 RIMS3Q9UJD0 308 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 FBXL2Q9UKC9 423 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 TRAV17A0A0B4J275 112 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 A0A0B4J2E0 115 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 A0A1B0GX12 115 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 ADAMDEC1O15204 470 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 GMFGO60234 142 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 LDLRP01130 860 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 GCKP35557 465 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 IDH2P48735 452 aaKnown RBP12.78□□□□□ -0.36
SHMT2-203ENST00000449049 DLX5P56178 289 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 TAS2R41P59536 307 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 GANABQ14697 944 aaKnown RBP12.78□□□□□ -0.36
SHMT2-203ENST00000449049 LINC00303Q3SY05 128 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 WBP2NLQ6ICG8 309 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 GALNTL5Q7Z4T8 443 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 OR4K17Q8NGC6 315 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 ABHD17AQ96GS6 310 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 CRELD1Q96HD1 420 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 SH3GL3Q99963 347 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 NTN4Q9HB63 628 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 KLHL1Q9NR64 748 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 CTPS2Q9NRF8 586 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 C6orf203Q9P0P8 240 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-203ENST00000449049 BOKQ9UMX3 212 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-203ENST00000449049 TESMINQ9Y4I5 508 aa12.78□□□□□ -0.36
SHMT2-203ENST00000449049 URB1O60287 2271 aaKnown RBP12.78□□□□□ -0.36
SHMT2-203ENST00000449049 TNRC6AQ8NDV7 1962 aaKnown RBP12.77□□□□□ -0.36
SHMT2-203ENST00000449049 TRAPPC13A5PLN9 417 aa12.77□□□□□ -0.36
SHMT2-203ENST00000449049 KLRC4-KLRK1H3BQV0 150 aa12.77□□□□□ -0.36
SHMT2-203ENST00000449049 K7EM74 188 aa12.77□□□□□ -0.36
SHMT2-203ENST00000449049 NUDT14O95848 222 aa12.77□□□□□ -0.36
SHMT2-203ENST00000449049 THY1P04216 161 aa12.77□□□□□ -0.36
SHMT2-203ENST00000449049 THRBP10828 461 aa12.77□□□□□ -0.36
SHMT2-203ENST00000449049 FUT4P22083 530 aa12.77□□□□□ -0.36
SHMT2-203ENST00000449049 MST1P26927 711 aa12.77□□□□□ -0.36
SHMT2-203ENST00000449049 RRM2P31350 389 aa12.77□□□□□ -0.36
SHMT2-203ENST00000449049 COPZ1P61923 177 aa12.77□□□□□ -0.36
SHMT2-203ENST00000449049 SPIBQ01892 262 aa12.77□□□□□ -0.36
SHMT2-203ENST00000449049 QPRTQ15274 297 aa12.77□□□□□ -0.36
SHMT2-203ENST00000449049 TOMM34Q15785 309 aaPredicted RBP12.77□□□□□ -0.36
SHMT2-203ENST00000449049 C1GALT1C1Q96EU7 318 aa12.77□□□□□ -0.36
SHMT2-203ENST00000449049 JSRP1Q96MG2 331 aaPredicted RBP12.77□□□□□ -0.36
SHMT2-203ENST00000449049 PTGES2Q9H7Z7 377 aa12.77□□□□□ -0.36
SHMT2-203ENST00000449049 NMNAT1Q9HAN9 279 aaPredicted RBP12.77□□□□□ -0.36
SHMT2-203ENST00000449049 ZFP64Q9NPA5 681 aa12.77□□□□□ -0.36
SHMT2-203ENST00000449049 VNN3Q9NY84 501 aa12.77□□□□□ -0.36
SHMT2-203ENST00000449049 TAS2R10Q9NYW0 307 aa12.77□□□□□ -0.36
SHMT2-203ENST00000449049 RHCGQ9UBD6 479 aa12.77□□□□□ -0.36
SHMT2-203ENST00000449049 NKX1-2Q9UD57 310 aaPredicted RBP12.77□□□□□ -0.36
SHMT2-203ENST00000449049 A0A1B0GWA3 101 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 ETV2O00321 342 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-203ENST00000449049 CBR3O75828 277 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 LYPD3O95274 346 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 BAG2O95816 211 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 IFNA8P32881 189 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 MEOX1P50221 254 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 FOXK2Q01167 660 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 ST3GAL3Q11203 375 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 KCNAB2Q13303 367 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 BLMHQ13867 455 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 ARSKQ6UWY0 536 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 Q6ZS92 163 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 GDF7Q7Z4P5 450 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 AMIGO2Q86SJ2 522 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 CADM2Q8N3J6 435 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 ZNF563Q8TA94 476 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 ST8SIA1Q92185 356 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 SLC41A3Q96GZ6 507 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 CENPNQ96H22 339 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-203ENST00000449049 GNRHR2Q96P88 292 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms