RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 CPNE2Q96FN4 548 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 DPH3Q96FX2 82 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 MARK4Q96L34 752 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 TRBV23-1A0A0A0MS06 115 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 GABBR2O75899 941 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 PDYNP01213 254 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 ITGA5P08648 1049 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 ATP6V1B1P15313 513 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 GGT1P19440 569 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 PLA2G7Q13093 441 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 LIN52Q52LA3 116 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 SVOPQ8N4V2 548 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR9A2Q8NGT5 310 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 SPACA9Q96E40 222 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 IFT27Q9BW83 186 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 BARHL1Q9BZE3 327 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZFP64Q9NPA5 681 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR6C76A6NM76 312 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 ACOX3O15254 700 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 PPM1BO75688 479 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 LCATP04180 440 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 FREM3P0C091 2139 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 ADARP55265 1226 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC36A3Q495N2 470 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 OTUD1Q5VV17 481 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 BRICD5Q6PL45 260 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 DEFB108BQ8NET1 73 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 BBS10Q8TAM1 723 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 HRASLS5Q96KN8 279 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 METTL8Q9H825 291 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 PPIL1Q9Y3C6 166 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 A0A1W2PQ72 361 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 PIP5K1CO60331 668 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 CBR3O75828 277 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 RPSAP08865 295 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 ANKRD34CP0C6C1 535 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 HOXB6P17509 224 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 COL8A1P27658 744 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 CDK6Q00534 326 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 NAAAQ02083 359 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 RHAGQ02094 409 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 SNTB1Q13884 538 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 OFCC1Q8IZS5 231 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 FAM168AQ92567 244 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF75CPQ92670 426 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 TMBIM1Q969X1 311 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 MAPKAP1Q9BPZ7 522 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 VIPAS39Q9H9C1 493 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 ARNTLO00327 626 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 TPST2O60704 377 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 APOC1P02654 83 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 GPIP06744 558 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 ADRA1AP35348 466 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 CSNK1A1P48729 337 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 PPP3R1P63098 170 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR7A5Q15622 319 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 NIPAL3Q6P499 406 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 DHFR2Q86XF0 187 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 PNLDC1Q8NA58 520 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 PSD4Q8NDX1 1056 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 GIPC3Q8TF64 312 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 C16orf78Q8WTQ4 265 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF473Q8WTR7 871 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC25A43Q8WUT9 341 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 CCL17Q92583 94 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR4K3Q96R72 315 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 MCHR1Q99705 422 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 EXOSC4Q9NPD3 245 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 HEATR5BQ9P2D3 2071 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 SNU13P55769 128 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 BIDP55957 195 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR12D2P58182 307 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 SCARB2Q14108 478 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF551Q7Z340 670 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZSWIM9Q86XI8 627 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 FAM86B1Q8N7N1 296 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 ELMOD3Q96FG2 381 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 PDLIM5Q96HC4 596 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 ARL8BQ9NVJ2 186 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF358Q9NW07 568 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 KCNMB2Q9Y691 235 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 BBIP1A8MTZ0 92 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 CLIC1O00299 241 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 SERPINB10P48595 397 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC35A1P78382 337 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 ST3GAL3Q11203 375 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 RAB32Q13637 225 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 PLA1AQ53H76 456 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 TRABD2AQ86V40 505 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZFP90Q8TF47 636 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 TSEN15Q8WW01 171 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 NSL1Q96IY1 281 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC41A2Q96JW4 573 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 DCTN5Q9BTE1 182 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 TPT1P8Q9HAU6 139 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 TREX1Q9NSU2 369 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 GRHPRQ9UBQ7 328 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 DAPP1Q9UN19 280 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 PSAT1Q9Y617 370 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZFC3H1O60293 1989 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms