RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 RTTNQ86VV8 2226 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 DPRXA6NFQ7 191 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 ZNF814B7Z6K7 855 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 CFLARO15519 480 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 ZNF264O43296 627 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 CD5LO43866 347 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 FAM153BP0C7A2 387 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 BMP4P12644 408 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 PRKCAP17252 672 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 GGT1P19440 569 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 FKBP2P26885 142 aaKnown RBP11.79□□□□□ -0.52
HMGB3-204ENST00000448905 OR3A2P47893 321 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 CSNK2A1P68400 391 aaPredicted RBP11.79□□□□□ -0.52
HMGB3-204ENST00000448905 FAM153CQ494X1 144 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 ARL13AQ5H913 290 aaPredicted RBP11.79□□□□□ -0.52
HMGB3-204ENST00000448905 TIMM23BQ5SRD1 257 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 CBLN3Q6UW01 205 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 GALNT5Q7Z7M9 940 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 C10orf107Q8IVU9 208 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 TMCO5AQ8N6Q1 288 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 OR2T11Q8NH01 316 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 OR2W6PQ8NHA6 318 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 KIF18AQ8NI77 898 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 TMEM234Q8WY98 164 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 TMEM158Q8WZ71 300 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 OR5B2Q96R09 309 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 TRIM2Q9C040 744 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 EMC3Q9P0I2 261 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 MGAT4BQ9UQ53 548 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 PTGDR2Q9Y5Y4 395 aa11.79□□□□□ -0.52
HMGB3-204ENST00000448905 HIVEP2P31629 2446 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 RNF212BA8MTL3 300 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 ZNF724A8MTY0 619 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 A8MV72 311 aaPredicted RBP11.78□□□□□ -0.52
HMGB3-204ENST00000448905 SCAMP2O15127 329 aaKnown RBP11.78□□□□□ -0.52
HMGB3-204ENST00000448905 SSX4O60224 188 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 PEX11AO75192 247 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 CYP7B1O75881 506 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 LYZL6O75951 148 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 LAMP1P11279 417 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 UBL4AP11441 157 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 EFNA1P20827 205 aaPredicted RBP11.78□□□□□ -0.52
HMGB3-204ENST00000448905 PRPS1L1P21108 318 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 SHC1P29353 583 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 CCR4P51679 360 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 QPRTQ15274 297 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 RAB35Q15286 201 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 PGGHGQ32M88 737 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 CHRFAM7AQ494W8 412 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 ATP6AP1LQ52LC2 224 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 SLC25A53Q5H9E4 307 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 EXOSC6Q5RKV6 272 aaKnown RBP11.78□□□□□ -0.52
HMGB3-204ENST00000448905 KANK2Q63ZY3 851 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 C3orf33Q6P1S2 294 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 KLHL17Q6TDP4 642 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 TMEM108Q6UXF1 575 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 UBE2J2Q8N2K1 259 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 OR7A2PQ8NGA2 310 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 TWIST2Q8WVJ9 160 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 ZHX1-C8orf76Q96EF9 292 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 PSD2Q9BQI7 771 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 GATA5Q9BWX5 397 aaPredicted RBP11.78□□□□□ -0.52
HMGB3-204ENST00000448905 TXLNGYQ9BZA5 131 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 TUBB1Q9H4B7 451 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 POU2F3Q9UKI9 436 aa11.78□□□□□ -0.52
HMGB3-204ENST00000448905 SPIN1Q9Y657 262 aaPredicted RBP11.78□□□□□ -0.52
HMGB3-204ENST00000448905 A0A1W2PNR3 127 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 CIB4A0PJX0 185 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 SERINC4A6NH21 518 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 SMIM23A6NLE4 172 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 CCT8L1PA6NM43 557 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 C9JVG2 144 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 SULT2B1O00204 365 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 NPHS1O60500 1241 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 CYTIPO60759 359 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 ADAM11O75078 769 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 AK1P00568 194 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 IGHV4-39P01824 125 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 PGCP20142 388 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 TOMM34Q15785 309 aaPredicted RBP11.77□□□□□ -0.53
HMGB3-204ENST00000448905 TMPPEQ6ZT21 453 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 EIF1ADQ8N9N8 165 aaKnown RBP11.77□□□□□ -0.53
HMGB3-204ENST00000448905 PSMA8Q8TAA3 256 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 UBLCP1Q8WVY7 318 aaPredicted RBP11.77□□□□□ -0.53
HMGB3-204ENST00000448905 ST8SIA1Q92185 356 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 NEUROG1Q92886 237 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 ZNF775Q96BV0 537 aaPredicted RBP11.77□□□□□ -0.53
HMGB3-204ENST00000448905 COQ8BQ96D53 544 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 RHOXF2Q9BQY4 288 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 TRAF4Q9BUZ4 470 aaPredicted RBP11.77□□□□□ -0.53
HMGB3-204ENST00000448905 LAT2Q9GZY6 243 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 SIRT3Q9NTG7 399 aaPredicted RBP11.77□□□□□ -0.53
HMGB3-204ENST00000448905 EXD2Q9NVH0 621 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 PCDHGB4Q9UN71 923 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 FBN1P35555 2871 aaKnown RBP11.77□□□□□ -0.53
HMGB3-204ENST00000448905 NSD1Q96L73 2696 aaPredicted RBP11.77□□□□□ -0.53
HMGB3-204ENST00000448905 FBN3Q75N90 2809 aa11.77□□□□□ -0.53
HMGB3-204ENST00000448905 IGHV3-15A0A0B4J1V0 119 aa11.76□□□□□ -0.53
HMGB3-204ENST00000448905 OR5H1A6NKK0 313 aa11.76□□□□□ -0.53
HMGB3-204ENST00000448905 GPR171O14626 319 aa11.76□□□□□ -0.53
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