RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 HTR2AP28223 471 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 MAGEA5P43359 124 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 SLC6A8P48029 635 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 SUMO3P55854 103 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 FOXK1P85037 733 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 CBFBQ13951 182 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 RPUSD3Q6P087 351 aaKnown RBP16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 DEF8Q6ZN54 512 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 ADGRG5Q8IZF4 528 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 WBP1Q96G27 269 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 RSRC1Q96IZ7 334 aaKnown RBP16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 MCHR1Q99705 422 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 NPAS1Q99742 590 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 AMBRA1Q9C0C7 1298 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 TSPAN10Q9H1Z9 355 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 UBQLN3Q9H347 655 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 DENND2DQ9H6A0 471 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 ZNF703Q9H7S9 590 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 PTGES2Q9H7Z7 377 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 HHATLQ9HCP6 504 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 MED17Q9NVC6 651 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 TAS2R10Q9NYW0 307 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 ANAPC2Q9UJX6 822 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 GTF3C1Q12789 2109 aa16.33■□□□□ 0.21
TRAPPC4-203ENST00000447216 DHRS12A0PJE2 317 aa16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 hCG_2039718K7EN88 272 aa16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 TRAPPC6AO75865 159 aa16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 MT-ND1P03886 318 aa16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 HK1P19367 917 aa16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 PGCP20142 388 aa16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 DPP4P27487 766 aa16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 YAP1P46937 504 aaKnown RBP16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 IDH2P48735 452 aaKnown RBP16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 ZNF41P51814 821 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 VLDLRP98155 873 aa16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 KLRB1Q12918 225 aa16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 QPRTQ15274 297 aa16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 TSEN54Q7Z6J9 526 aaKnown RBP16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 YRDCQ86U90 279 aaKnown RBP16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 SLC22A16Q86VW1 577 aa16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 TSPYL5Q86VY4 417 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 CADM2Q8N3J6 435 aa16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 OR5M1Q8NGP8 315 aa16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 ZNF563Q8TA94 476 aa16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 CANT1Q8WVQ1 401 aa16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 SLC35B4Q969S0 331 aa16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 B4GALT7Q9UBV7 327 aa16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 AURKCQ9UQB9 309 aa16.33■□□□□ 0.2
TRAPPC4-203ENST00000447216 IGSF10Q6WRI0 2623 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 CPSF4LA6NMK7 179 aaKnown RBP16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 J3KTA2 159 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 ACOT7O00154 380 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 TFECO14948 347 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 WISP2O76076 250 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 DIRAS1O95057 198 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 IFNW1P05000 195 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 GP1BBP13224 206 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 ZNF24P17028 368 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 MST1P26927 711 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 SRD5A2P31213 254 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 DSCR4P56555 118 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 KCNC4Q03721 635 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 CHRNB3Q05901 458 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 HYAL4Q2M3T9 481 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 PLPPR5Q32ZL2 321 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 WIPI1Q5MNZ9 446 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 RANBP3LQ86VV4 465 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 ZGRF1Q86YA3 2104 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 CISD2Q8N5K1 135 aaKnown RBP16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 FAM83FQ8NEG4 500 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 C7orf34Q96L11 122 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 UBL7Q96S82 380 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 ZNF559Q9BR84 538 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 UGT2B28Q9BY64 529 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 DEFB127Q9H1M4 99 aa16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 TESQ9UGI8 421 aaKnown RBP16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 RPH3AQ9Y2J0 694 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC4-203ENST00000447216 FAM47E-STBD1D6RA91 191 aa16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 ZIC3O60481 467 aa16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 SEMA7AO75326 666 aa16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 SESN3P58005 492 aa16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 ACTR3P61158 418 aa16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 ALDH6A1Q02252 535 aaKnown RBP16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 FOXF1Q12946 379 aa16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 FOXD4Q12950 439 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 OR1Q1Q15612 314 aa16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 INAQ16352 499 aa16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 FAM98BQ52LJ0 330 aaKnown RBP16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 PRR30Q53SZ7 412 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 ENTPD8Q5MY95 495 aa16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 PLEKHM3Q6ZWE6 761 aa16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 ZDHHC21Q8IVQ6 265 aa16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 FAM109AQ8N4B1 249 aa16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 OR14L1PQ8NHC6 308 aa16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 POC1BQ8TC44 478 aa16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 SLCO4A1Q96BD0 722 aa16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 OR2B2Q9GZK3 357 aa16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 SLC6A15Q9H2J7 730 aa16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 EVA1AQ9H8M9 152 aa16.31■□□□□ 0.2
TRAPPC4-203ENST00000447216 LIPGQ9Y5X9 500 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms