RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 ZFAND1Q8TCF1 268 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 SENP5Q96HI0 755 aaPredicted RBP8□□□□□ -1.13
PTPN3-204ENST00000446349 DECR2Q9NUI1 292 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 STEAP1Q9UHE8 339 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 SLCO2B1O94956 709 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 PRDX3P30048 256 aaKnown RBP8□□□□□ -1.13
PTPN3-204ENST00000446349 ECI1P42126 302 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 MAP2K6P52564 334 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 RRAS2P62070 204 aaPredicted RBP8□□□□□ -1.13
PTPN3-204ENST00000446349 CLPPQ16740 277 aaPredicted RBP8□□□□□ -1.13
PTPN3-204ENST00000446349 NKPD1Q17RQ9 610 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 AGAP7PQ5VUJ5 663 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 LPCAT3Q6P1A2 487 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 CADM4Q8NFZ8 388 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 IFI44Q8TCB0 444 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 AGAP4Q96P64 663 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 PHB2Q99623 299 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 MGLLQ99685 303 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 PLEKHJ1Q9NW61 149 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 RHCGQ9UBD6 479 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 SYT5O00445 386 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 HNRNPA0Q13151 305 aaKnown RBP8□□□□□ -1.13
PTPN3-204ENST00000446349 SLC16A14Q7RTX9 510 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF551Q7Z340 670 aaPredicted RBP8□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF761Q86XN6 746 aaPredicted RBP8□□□□□ -1.13
PTPN3-204ENST00000446349 SLC6A18Q96N87 628 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 ETAA1Q9NY74 926 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 CNOT2Q9NZN8 540 aaKnown RBP8□□□□□ -1.13
PTPN3-204ENST00000446349 GSKIPQ9P0R6 139 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 GPR137BO60478 399 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 EIF4EP06730 217 aaKnown RBP8□□□□□ -1.13
PTPN3-204ENST00000446349 GLB1P16278 677 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 WNT4P56705 351 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 ELMOD2Q8IZ81 293 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 SORCS2Q96PQ0 1159 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 OR7D2Q96RA2 312 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 PRELID1Q9Y255 219 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 PLEKHM1Q9Y4G2 1056 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 DIRAS1O95057 198 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 CARD18P57730 90 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 SLC37A3Q8NCC5 494 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 C3orf58Q8NDZ4 430 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 MUL1Q969V5 352 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 ALOX12BO75342 701 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 CSF1P09603 554 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 TEKQ02763 1124 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 PPP1R3AQ16821 1122 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 TBC1D28Q2M2D7 210 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 C3orf38Q5JPI3 329 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 METRNLQ641Q3 311 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 ISLR2Q6UXK2 745 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 NLGN4XQ8N0W4 816 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 ENDOVQ8N8Q3 282 aaKnown RBP8□□□□□ -1.13
PTPN3-204ENST00000446349 OR4K13Q8NH42 304 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 BPIFA2Q96DR5 249 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 PRRT1Q99946 306 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 GSTO2Q9H4Y5 243 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 WNT16Q9UBV4 365 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 LCKP06239 509 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 POU2F2P09086 479 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 PRSS3P35030 304 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 TAS2R46P59540 309 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 COL9A3Q14050 684 aaPredicted RBP7.99□□□□□ -1.13
PTPN3-204ENST00000446349 MPP2Q14168 576 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 ODF4Q2M2E3 257 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 AAED1Q7RTV5 226 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 TAMM41Q96BW9 452 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF300Q96RE9 604 aaPredicted RBP7.99□□□□□ -1.13
PTPN3-204ENST00000446349 B3GNT3Q9Y2A9 372 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 RPH3AQ9Y2J0 694 aaPredicted RBP7.99□□□□□ -1.13
PTPN3-204ENST00000446349 A0A087WZY1 265 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 CLCA1A8K7I4 914 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 P2RX6O15547 441 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 HMGN2P05204 90 aaKnown RBP7.99□□□□□ -1.13
PTPN3-204ENST00000446349 ADPRHP54922 357 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 TAS2R20P59543 309 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 PPA1Q15181 289 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 KCTD9Q7L273 389 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 LRRC56Q8IYG6 542 aaPredicted RBP7.99□□□□□ -1.13
PTPN3-204ENST00000446349 PHYHIPQ92561 330 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 SIPA1L3O60292 1781 aaPredicted RBP7.99□□□□□ -1.13
PTPN3-204ENST00000446349 TRAV36DV7A0A075B6V5 113 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 PPP1R3DO95685 299 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 SERPINA5P05154 406 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 CXCR4P61073 352 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 IL20RBQ6UXL0 311 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 UBL7Q96S82 380 aaPredicted RBP7.99□□□□□ -1.13
PTPN3-204ENST00000446349 ALG8Q9BVK2 526 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 TMEM168Q9H0V1 697 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 OBP2BQ9NPH6 170 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 C14orf119Q9NWQ9 140 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 WBP1LQ9NX94 342 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 VDAC3Q9Y277 283 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 NME7Q9Y5B8 376 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 ADRA1AP35348 466 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 APOBEC1P41238 236 aaKnown RBP7.99□□□□□ -1.13
PTPN3-204ENST00000446349 MAGEA12P43365 314 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 FXYD6P3P58550 94 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 CATR1Q13166 79 aa7.99□□□□□ -1.13
PTPN3-204ENST00000446349 SFT2D3Q587I9 215 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms