RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ESM1Q9NQ30 184 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 SIGLEC8Q9NYZ4 499 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 ABCG2Q9UNQ0 655 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 TRAF3IP3Q9Y228 551 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 GMPPBQ9Y5P6 360 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 GRIN2DO15399 1336 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 BCORL1Q5H9F3 1711 aa3.67□□□□□ -1.82
HMGB1P48-201ENST00000446155 RPAP1Q9BWH6 1393 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 A0A1W2PPE3 182 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 MEX3AA1L020 520 aaKnown RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 ZNF840PA6NDX5 716 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 ACOD1A6NK06 481 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 RNF212BA8MTL3 300 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 LSM1O15116 133 aaKnown RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 PRKAB2O43741 272 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 PAHP00439 452 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 IGHG3P01860 377 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 FTH1P02794 183 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 IGFBP1P08833 259 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 HOXB7P09629 217 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 ZSCAN5DPP0CG00 497 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 MCF2P10911 925 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 ATP1B2P14415 290 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 CD1DP15813 335 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 SELEP16581 610 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 TNNI1P19237 187 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 CPN2P22792 545 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 ATP5A1P25705 553 aaKnown RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 HNRNPH3P31942 346 aaKnown RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 RPL4P36578 427 aaKnown RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 CRYBB2P43320 205 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 DUSP3P51452 185 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 SLC7A2P52569 658 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 CDH6P55285 790 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 GSCP56915 257 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 RPS6P62753 249 aaKnown RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 PEX6Q13608 980 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 FASTKQ14296 549 aaKnown RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 GK3PQ14409 553 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 KNOP1Q1ED39 458 aaKnown RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 SLC5A12Q1EHB4 618 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 MICBQ29980 383 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 KLHL40Q2TBA0 621 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 HLA-BQ31612 363 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 TP53I3Q53FA7 332 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 ZNF613Q6PF04 617 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 APTXQ7Z2E3 356 aaKnown RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 LINC01561Q8N1V8 128 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 FGFRL1Q8N441 504 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 OR2L3Q8NG85 312 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 MAIP1Q8WWC4 291 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 ELMO1Q92556 727 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 MOCOSQ96EN8 888 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 DNAJA3Q96EY1 480 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 LINC00479Q96M42 142 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 ZNF599Q96NL3 588 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 FAM173AQ9BQD7 235 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 SYT15Q9BQS2 421 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 ST6GALNAC5Q9BVH7 336 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 FGFBP2Q9BYJ0 223 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 XKR8Q9H6D3 395 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 IL1RAPQ9NPH3 570 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 PDP1Q9P0J1 537 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 RCOR3Q9P2K3 495 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 PSMC3IPQ9P2W1 217 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 CIDEBQ9UHD4 219 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 SLC7A8Q9UHI5 535 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 PRPF19Q9UMS4 504 aaKnown RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 PACSIN2Q9UNF0 486 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 CSDC2Q9Y534 153 aaKnown RBP3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 CSNK1G3Q9Y6M4 447 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 ATP10AO60312 1499 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 WDR7Q9Y4E6 1490 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 STRCQ7RTU9 1775 aa3.66□□□□□ -1.82
HMGB1P48-201ENST00000446155 WRNQ14191 1432 aaPredicted RBP eCLIP3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 POGZQ7Z3K3 1410 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 IGHV3-20A0A0C4DH32 117 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 TRBV5-4A0A0C4DH59 114 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 OR6C65A6NJZ3 312 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 MPTX1A8MV57 137 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 F5H6K3 240 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 GOLGA8TH3BQL2 631 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 K7EQD1 137 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 MAGEC1O60732 1142 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 RAMP3O60896 148 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 FLOT1O75955 427 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 DIRAS1O95057 198 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 OR9G9P0C7N8 305 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 CHMLP26374 656 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 ATP5C1P36542 298 aaKnown RBP3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 MMP12P39900 470 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 GYG1P46976 350 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 POU3F4P49335 361 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 HILS1P60008 231 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 PLP1P60201 277 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 KLRC3Q07444 240 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 CHRNA6Q15825 494 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 FAM189A2Q15884 450 aa3.65□□□□□ -1.83
HMGB1P48-201ENST00000446155 SLC25A52Q3SY17 297 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms