RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 LYNX1G3V0Z9 82 aa5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 TRAPPC2LH3BP13 241 aa5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 FGF17O60258 216 aa5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 LIPFP07098 398 aa5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 LYNX1P0DP58 116 aa5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 PAICSP22234 425 aaKnown RBP5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 CNTFP26441 200 aa5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 SSTR4P31391 388 aa5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 CD80P33681 288 aa5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 GLRXP35754 106 aa5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 SLC16A1P53985 500 aa5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 C17orf67Q0P5P2 114 aa5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 ABLIM2Q6H8Q1 611 aa5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 KCTD18Q6PI47 426 aaPredicted RBP5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 AGTRAPQ6RW13 159 aa5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 MISPQ8IVT2 679 aa5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 MUC20Q8N307 709 aaPredicted RBP5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 ZCCHC7Q8N3Z6 543 aaKnown RBP5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 ANKK1Q8NFD2 765 aa5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 PARPBPQ9NWS1 579 aa5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.26□□□□□ -1.57
BRAFP1-201ENST00000445336 CSMD3Q7Z407 3707 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 KIR2DS1A0A191URI9 304 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 TTC36A6NLP5 189 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 OR1I1O60431 355 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 GAS8O95995 478 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 IGKV3-15P01624 115 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 SERPIND1P05546 499 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 ADH4P08319 380 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 SYT1P21579 422 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 CPN2P22792 545 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 TPD52P55327 224 aaPredicted RBP5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 CHRNEQ04844 493 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 TFDP2Q14188 446 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 ESCO2Q56NI9 601 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 C6orf89Q6UWU4 347 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 KRT78Q8N1N4 520 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 C8orf46Q8TAG6 207 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 ABHD3Q8WU67 409 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 RAB40AQ8WXH6 277 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 WDR89Q96FK6 387 aaPredicted RBP5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 QKIQ96PU8 341 aaKnown RBP eCLIP5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 NXF5Q9H1B4 397 aaKnown RBP5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 EHD1Q9H4M9 534 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 KLHL31Q9H511 634 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 FOXJ3Q9UPW0 622 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 DYRK1BQ9Y463 629 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 A0A0J9YW62 118 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 C4orf51C9J302 202 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 TGDSO95455 350 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 MT-ND5P03915 603 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 CBR1P16152 277 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 BUD31P41223 144 aaPredicted RBP5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 HGFACQ04756 655 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 GALNT1Q10472 559 aaPredicted RBP5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 KLHL38Q2WGJ6 581 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 LRFN4Q6PJG9 635 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 C5orf24Q7Z6I8 188 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 LINC00523Q86TU6 105 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 CARM1Q86X55 608 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 KLHL36Q8N4N3 616 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 PPFIBP2Q8ND30 876 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 AMDHD1Q96NU7 426 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 ST6GALNAC5Q9BVH7 336 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 MAK16Q9BXY0 300 aaKnown RBP5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 SHCBP1LQ9BZQ2 653 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 AICDAQ9GZX7 198 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 TOR3AQ9H497 397 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 RPF2Q9H7B2 306 aaKnown RBP5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 LRRC40Q9H9A6 602 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 PRDM7Q9NQW5 492 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 LIMA1Q9UHB6 759 aaKnown RBP5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 REXO2Q9Y3B8 237 aaKnown RBP5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 ITGA5P08648 1049 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 CD28P10747 220 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 TCEA1P23193 301 aaKnown RBP5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 KDELR1P24390 212 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 ARR3P36575 388 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 EMDP50402 254 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 KRT222Q8N1A0 295 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 ANKRD53Q8N9V6 530 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 CDCA4Q9BXL8 241 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 NPFFR1Q9GZQ6 430 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 CATSPERZQ9NTU4 200 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 ACOXLQ9NUZ1 547 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 SLCO1C1Q9NYB5 712 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 CGGBP1Q9UFW8 167 aaPredicted RBP5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 ZNF639Q9UID6 485 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 MRTO4Q9UKD2 239 aaKnown RBP5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 CHST2Q9Y4C5 530 aa5.25□□□□□ -1.57
BRAFP1-201ENST00000445336 VPS13DQ5THJ4 4388 aa5.24□□□□□ -1.57
BRAFP1-201ENST00000445336 LDB3O75112 727 aa5.24□□□□□ -1.57
BRAFP1-201ENST00000445336 SKAP2O75563 359 aaPredicted RBP5.24□□□□□ -1.57
BRAFP1-201ENST00000445336 IGF2P01344 180 aa5.24□□□□□ -1.57
BRAFP1-201ENST00000445336 NGFRP08138 427 aa5.24□□□□□ -1.57
BRAFP1-201ENST00000445336 ENO2P09104 434 aaPredicted RBP5.24□□□□□ -1.57
BRAFP1-201ENST00000445336 SHC1P29353 583 aa5.24□□□□□ -1.57
BRAFP1-201ENST00000445336 STX2P32856 288 aa5.24□□□□□ -1.57
BRAFP1-201ENST00000445336 EVI2BP34910 448 aa5.24□□□□□ -1.57
BRAFP1-201ENST00000445336 FEN1P39748 380 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms