RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 DOT1LQ8TEK3 1739 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.5■□□□□ 0.39
SHANK3-203ENST00000445220 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.5■□□□□ 0.39
SHANK3-203ENST00000445220 SLC22A23A1A5C7 686 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 IL4RP24394 825 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 PGGHGQ32M88 737 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 TMEM239Q8WW34 195 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 C10orf90Q96M02 699 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 ACPTQ9BZG2 426 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 SLAMF7Q9NQ25 335 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 MYEF2Q9P2K5 600 aaKnown RBP17.5■□□□□ 0.39
SHANK3-203ENST00000445220 NAV1Q8NEY1 1877 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 A0A0U1RQK1 487 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 WNT7BP56706 349 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 KIAA1024LP59773 190 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 RPS25P62851 125 aaKnown RBP17.5■□□□□ 0.39
SHANK3-203ENST00000445220 GALK2Q01415 458 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 ZNF425Q6IV72 752 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 OR51D1Q8NGF3 324 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 OR51T1Q8NGJ9 327 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 TMEM174Q8WUU8 243 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 NENFQ9UMX5 172 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 HRH3Q9Y5N1 445 aa17.5■□□□□ 0.39
SHANK3-203ENST00000445220 PUS1Q9Y606 427 aaKnown RBP eCLIP17.5■□□□□ 0.39
SHANK3-203ENST00000445220 OR2A25A4D2G3 310 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 TTLL8A6PVC2 850 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 TPPPO94811 219 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 PODNL1Q6PEZ8 512 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 KCNIP4Q6PIL6 250 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 TMEM221A6NGB7 291 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 PPP1R2P9O14990 202 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 PSMB10P40306 273 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 FXYD4P59646 89 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 LTBQ06643 244 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 P4HA3Q7Z4N8 544 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 PITX2Q99697 317 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 PAAF1Q9BRP4 392 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 CRB3Q9BUF7 120 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 MVB12BQ9H7P6 319 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 FBXO8Q9NRD0 319 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 THBS2P35442 1172 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 FCRLAQ7L513 359 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 ZNF619Q8N2I2 560 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 OR4F15Q8NGB8 312 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 FYTTD1Q96QD9 318 aaKnown RBP17.49■□□□□ 0.39
SHANK3-203ENST00000445220 BOCQ9BWV1 1114 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 PITHD1Q9GZP4 211 aaPredicted RBP17.49■□□□□ 0.39
SHANK3-203ENST00000445220 CRYBG1Q9Y4K1 1723 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 AIPO00170 330 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 CRTAPO75718 401 aaPredicted RBP17.49■□□□□ 0.39
SHANK3-203ENST00000445220 CYBAP13498 195 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 HOXB9P17482 250 aaPredicted RBP17.49■□□□□ 0.39
SHANK3-203ENST00000445220 PTBP1P26599 531 aaKnown RBP eCLIP17.49■□□□□ 0.394e-6■□□□□ 8.9
SHANK3-203ENST00000445220 PRKAR1BP31321 381 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 ARRB1P49407 418 aaPredicted RBP17.49■□□□□ 0.39
SHANK3-203ENST00000445220 RAB33AQ14088 237 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 PTRH1Q86Y79 214 aaKnown RBP17.49■□□□□ 0.39
SHANK3-203ENST00000445220 MFSD6LQ8IWD5 586 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 SLC25A31Q9H0C2 315 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 TREX1Q9NSU2 369 aa17.49■□□□□ 0.39
SHANK3-203ENST00000445220 TESQ9UGI8 421 aaKnown RBP17.49■□□□□ 0.39
SHANK3-203ENST00000445220 RGPD2P0DJD1 1756 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 FEZF1A0PJY2 475 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 DVL2O14641 736 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 GPRIN2O60269 458 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 TMEM225BP0DP42 221 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 POLR2CP19387 275 aaPredicted RBP17.48■□□□□ 0.39
SHANK3-203ENST00000445220 LIPAP38571 399 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 MTNR1BP49286 362 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 STK19P49842 368 aaPredicted RBP17.48■□□□□ 0.39
SHANK3-203ENST00000445220 RTP2Q5QGT7 225 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 TMEM40Q8WWA1 233 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 ZNF583Q96ND8 569 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 CPPED1Q9BRF8 314 aaPredicted RBP17.48■□□□□ 0.39
SHANK3-203ENST00000445220 C1GALT1Q9NS00 363 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 PRICKLE3O43900 615 aaPredicted RBP17.48■□□□□ 0.39
SHANK3-203ENST00000445220 CNMDO75829 334 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 CD163Q86VB7 1156 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 CMTM1Q8IZ96 169 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 ZFP82Q8N141 532 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 ATOH8Q96SQ7 321 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 DPH7Q9BTV6 452 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 OR5K4A6NMS3 321 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 SULT1C4O75897 302 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 CNOT4O95628 575 aaKnown RBP17.48■□□□□ 0.39
SHANK3-203ENST00000445220 MT-CO2P00403 227 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 PRRT3Q5FWE3 981 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 NKX6-2Q9C056 277 aaPredicted RBP17.48■□□□□ 0.39
SHANK3-203ENST00000445220 PIGMQ9H3S5 423 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 SFXN1Q9H9B4 322 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 IER3IP1Q9Y5U9 82 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 A0A0B4J2A0 478 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 K7EPK0 472 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 SERPINA5P05154 406 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 PLP2Q04941 152 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 CDC20Q12834 499 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 NIPAL3Q6P499 406 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 FAM71E2Q8N5Q1 922 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 OR1S1Q8NH92 325 aa17.48■□□□□ 0.39
SHANK3-203ENST00000445220 ST6GALNAC5Q9BVH7 336 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms