RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 GOLGA6L10A6NI86 522 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 CCT8L1PA6NM43 557 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 RSPH10B2B2RC85 870 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 GOLGA8KD6RF30 607 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 NPIPA5E9PKD4 350 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 H3BQF6 201 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 PDLIM1O00151 329 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 PGRMC1O00264 195 aaKnown RBP3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 MAPK13O15264 365 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 TYROBPO43914 113 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 TSC22D2O75157 780 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 PDE5AO76074 875 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 TOXO94900 526 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 SLITRK3O94933 977 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 NUDT14O95848 222 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 THY1P04216 161 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 WNT2P09544 360 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 H2AFZP0C0S5 128 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 RSPH10BP0C881 870 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 RPS12P25398 132 aaKnown RBP3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 TMOD1P28289 359 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 PRDX6P30041 224 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 NMT1P30419 496 aaKnown RBP3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 SFNP31947 248 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 ATP6V1E1P36543 226 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 POU3F4P49335 361 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 WASHC5Q12768 1159 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 CUL1Q13616 776 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 RUNX3Q13761 415 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 BTG3Q14201 252 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 MS4A13Q5J8X5 152 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 ATAD3CQ5T2N8 411 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 NEK5Q6P3R8 708 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 FAM159AQ6UWV7 190 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 H2AFVQ71UI9 128 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 ZNF720Q7Z2F6 126 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 ZNF571Q7Z3V5 609 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 PEX26Q7Z412 305 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 SERINC5Q86VE9 423 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 OR4F17Q8NGA8 305 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 RHOXF1Q8NHV9 184 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 AENQ8WTP8 325 aaKnown RBP3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 U2AF1L4Q8WU68 220 aaKnown RBP3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 CTNNBL1Q8WYA6 563 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 ZBED6CLQ96FA7 236 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 OR4F4Q96R69 305 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 NDUFAF3Q9BU61 184 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 ABCG8Q9H221 673 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 MYOZ2Q9NPC6 264 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 ESM1Q9NQ30 184 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 AGPAT3Q9NRZ7 376 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 CENPMQ9NSP4 180 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 CNOT2Q9NZN8 540 aaKnown RBP3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 SPASTQ9UBP0 616 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 PURGQ9UJV8 347 aaKnown RBP3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 HPCAL4Q9UM19 191 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 SLC9A8Q9Y2E8 581 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 NAALAD2Q9Y3Q0 740 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 MYH10P35580 1976 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 A0A087X0T9 212 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 ZSCAN5CA6NGD5 496 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 LRRIQ3A6PVS8 624 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 F8VZ95 297 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 H0YCG3 227 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 ERLIN2O94905 339 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 LYPLA2O95372 231 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 SNRPCP09234 159 aaKnown RBP3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 GIG44P09565 113 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 FAM228BP0C875 321 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 STMN1P16949 149 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 CCND2P30279 289 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 YWHABP31946 246 aaKnown RBP3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 QARSP47897 775 aaKnown RBP3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 RPL34P49207 117 aaKnown RBP3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 CASP4P49662 377 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 PSMC5P62195 406 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 PAX2Q02962 417 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 ZSCAN26Q16670 478 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 PPP1R3AQ16821 1122 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 CNPY1Q3B7I2 92 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 LRIT3Q3SXY7 679 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 TIMM50Q3ZCQ8 353 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 ACSF3Q4G176 576 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 VITQ6UXI7 678 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 OTUD6AQ7L8S5 288 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 RANBP3LQ86VV4 465 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 C12orf56Q8IXR9 622 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 ELMOD2Q8IZ81 293 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 UBL4BQ8N7F7 174 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 EIF1ADQ8N9N8 165 aaKnown RBP3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 CCDC26Q8TAB7 109 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 ACTRT1Q8TDG2 376 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 KIFAP3Q92845 792 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 LHX4Q969G2 390 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 LRRC45Q96CN5 670 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 ZBED3Q96IU2 234 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 SPXQ9BT56 116 aa3.39□□□□□ -1.87
HMGB3P6-201ENST00000444896 FAM107BQ9H098 131 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms