RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 SLC16A11Q8NCK7 471 aa13.06□□□□□ -0.32
MRPL40-202ENST00000443660 FAM76AQ8TAV0 307 aa13.06□□□□□ -0.32
MRPL40-202ENST00000443660 FBXO30Q8TB52 745 aa13.06□□□□□ -0.32
MRPL40-202ENST00000443660 MRGPRX4Q96LA9 322 aa13.06□□□□□ -0.32
MRPL40-202ENST00000443660 FOXN4Q96NZ1 517 aa13.06□□□□□ -0.32
MRPL40-202ENST00000443660 ZNF300Q96RE9 604 aaPredicted RBP13.06□□□□□ -0.32
MRPL40-202ENST00000443660 C1QTNF6Q9BXI9 259 aa13.06□□□□□ -0.32
MRPL40-202ENST00000443660 EMC3Q9P0I2 261 aa13.06□□□□□ -0.32
MRPL40-202ENST00000443660 TIMM22Q9Y584 194 aa13.06□□□□□ -0.32
MRPL40-202ENST00000443660 ACTL7BQ9Y614 415 aa13.06□□□□□ -0.32
MRPL40-202ENST00000443660 SLC25A15Q9Y619 301 aa13.06□□□□□ -0.32
MRPL40-202ENST00000443660 CADP27708 2225 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 IGHV4-61A0A0C4DH41 118 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 A0A1W2PNR3 127 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 A0A1W2PR80 420 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 SERTM1A2A2V5 107 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 PDPK1O15530 556 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 ACP2P11117 423 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 ATP6V1C1P21283 382 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 SERPINB9P50453 376 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 PKNOX1P55347 436 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 SUMO3P55854 103 aaPredicted RBP13.05□□□□□ -0.32
MRPL40-202ENST00000443660 SELENBP1Q13228 472 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 ZCCHC12Q6PEW1 402 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 LRIG3Q6UXM1 1119 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 IKBIPQ70UQ0 350 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 SPATA4Q8NEY3 305 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 ZFP28Q8NHY6 868 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 ZMYND19Q96E35 227 aaPredicted RBP13.05□□□□□ -0.32
MRPL40-202ENST00000443660 OR5B2Q96R09 309 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 HOXD1Q9GZZ0 328 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 ACSS3Q9H6R3 686 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 MYOZ1Q9NP98 299 aaPredicted RBP13.05□□□□□ -0.32
MRPL40-202ENST00000443660 ASB6Q9NWX5 421 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 TMEFF2Q9UIK5 374 aaPredicted RBP13.05□□□□□ -0.32
MRPL40-202ENST00000443660 CARD8Q9Y2G2 431 aa13.05□□□□□ -0.32
MRPL40-202ENST00000443660 POLR3HQ9Y535 204 aaPredicted RBP13.05□□□□□ -0.32
MRPL40-202ENST00000443660 SMAD9O15198 467 aaKnown RBP13.04□□□□□ -0.32
MRPL40-202ENST00000443660 IGHV3-9P01782 118 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 SBK3P0C264 359 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 ZNF23P17027 643 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 PRKCAP17252 672 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 IMPDH1P20839 514 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 EDNRAP25101 427 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 PHC1P78364 1004 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 POU6F2P78424 691 aaPredicted RBP13.04□□□□□ -0.32
MRPL40-202ENST00000443660 LCP2Q13094 533 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 DUSP5Q16690 384 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 CCNJQ5T5M9 372 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 NOXRED1Q6NXP6 359 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 CBLN3Q6UW01 205 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 ZDHHC24Q6UX98 284 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 TMEM151AQ8N4L1 468 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.04□□□□□ -0.32
MRPL40-202ENST00000443660 SGMS2Q8NHU3 365 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 GPR119Q8TDV5 335 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 JADE3Q92613 823 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 ZNF75CPQ92670 426 aaPredicted RBP13.04□□□□□ -0.32
MRPL40-202ENST00000443660 APH1AQ96BI3 265 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 FBXO17Q96EF6 278 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 CHMP6Q96FZ7 201 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 MUS81Q96NY9 551 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 MS4A4EQ96PG1 132 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 BTBD2Q9BX70 525 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 OCEL1Q9H607 264 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 TAS2R16Q9NYV7 291 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 ICAM5Q9UMF0 924 aa13.04□□□□□ -0.32
MRPL40-202ENST00000443660 NOSIPQ9Y314 301 aaKnown RBP13.04□□□□□ -0.32
MRPL40-202ENST00000443660 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.04□□□□□ -0.32
MRPL40-202ENST00000443660 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.03□□□□□ -0.32
MRPL40-202ENST00000443660 SNRPD2P62316 118 aaKnown RBP13.03□□□□□ -0.32
MRPL40-202ENST00000443660 MLC1Q15049 377 aa13.03□□□□□ -0.32
MRPL40-202ENST00000443660 TOMM34Q15785 309 aaPredicted RBP13.03□□□□□ -0.32
MRPL40-202ENST00000443660 GIMAP5Q96F15 307 aa13.03□□□□□ -0.32
MRPL40-202ENST00000443660 C16orf58Q96GQ5 468 aa13.03□□□□□ -0.32
MRPL40-202ENST00000443660 TMEM237Q96Q45 408 aa13.03□□□□□ -0.32
MRPL40-202ENST00000443660 KCNA7Q96RP8 456 aa13.03□□□□□ -0.32
MRPL40-202ENST00000443660 VRK1Q99986 396 aaPredicted RBP13.03□□□□□ -0.32
MRPL40-202ENST00000443660 BHLHE41Q9C0J9 482 aaPredicted RBP13.03□□□□□ -0.32
MRPL40-202ENST00000443660 SERINC1Q9NRX5 453 aa13.03□□□□□ -0.32
MRPL40-202ENST00000443660 METRNQ9UJH8 293 aa13.03□□□□□ -0.32
MRPL40-202ENST00000443660 YLPM1P49750 1951 aaKnown RBP13.02□□□□□ -0.32
MRPL40-202ENST00000443660 MEGF8Q7Z7M0 2845 aa13.02□□□□□ -0.33
MRPL40-202ENST00000443660 A0A0A6YYJ9 748 aa13.02□□□□□ -0.33
MRPL40-202ENST00000443660 SLCO1B7G3V0H7 640 aa13.02□□□□□ -0.33
MRPL40-202ENST00000443660 CSNK2A1P68400 391 aaPredicted RBP13.02□□□□□ -0.33
MRPL40-202ENST00000443660 GABRA6Q16445 453 aa13.02□□□□□ -0.33
MRPL40-202ENST00000443660 SWI5Q1ZZU3 235 aa13.02□□□□□ -0.33
MRPL40-202ENST00000443660 KLHL26Q53HC5 615 aa13.02□□□□□ -0.33
MRPL40-202ENST00000443660 C3orf56Q8N813 242 aa13.02□□□□□ -0.33
MRPL40-202ENST00000443660 TOR1AIP2Q8NFQ8 470 aa13.02□□□□□ -0.33
MRPL40-202ENST00000443660 RFWD2Q8NHY2 731 aa13.02□□□□□ -0.33
MRPL40-202ENST00000443660 ZFAND2BQ8WV99 257 aa13.02□□□□□ -0.33
MRPL40-202ENST00000443660 CIDECQ96AQ7 238 aaPredicted RBP13.02□□□□□ -0.33
MRPL40-202ENST00000443660 OTUB1Q96FW1 271 aaPredicted RBP13.02□□□□□ -0.33
MRPL40-202ENST00000443660 SORCS2Q96PQ0 1159 aa13.02□□□□□ -0.33
MRPL40-202ENST00000443660 MID1IP1Q9NPA3 183 aa13.02□□□□□ -0.33
MRPL40-202ENST00000443660 RRAGDQ9NQL2 400 aaPredicted RBP13.02□□□□□ -0.33
MRPL40-202ENST00000443660 GIN1Q9NXP7 522 aa13.02□□□□□ -0.33
MRPL40-202ENST00000443660 TRAF6Q9Y4K3 522 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms