RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 RNF220Q5VTB9 566 aa14.48□□□□□ -0.09
USP39-205ENST00000442708 RTL6Q6ICC9 239 aa14.48□□□□□ -0.09
USP39-205ENST00000442708 CLEC18BQ6UXF7 455 aa14.48□□□□□ -0.09
USP39-205ENST00000442708 GRAMD2AQ8IUY3 354 aa14.48□□□□□ -0.09
USP39-205ENST00000442708 GTPBP8Q8N3Z3 284 aaPredicted RBP14.48□□□□□ -0.09
USP39-205ENST00000442708 CLEC18CQ8NCF0 446 aa14.48□□□□□ -0.09
USP39-205ENST00000442708 TOR1AIP2Q8NFQ8 470 aa14.48□□□□□ -0.09
USP39-205ENST00000442708 RELTQ969Z4 430 aa14.48□□□□□ -0.09
USP39-205ENST00000442708 REXO5Q96IC2 774 aaKnown RBP14.48□□□□□ -0.09
USP39-205ENST00000442708 RNF145Q96MT1 663 aa14.48□□□□□ -0.09
USP39-205ENST00000442708 WFDC6Q9BQY6 131 aa14.48□□□□□ -0.09
USP39-205ENST00000442708 PRDM14Q9GZV8 571 aa14.48□□□□□ -0.09
USP39-205ENST00000442708 ABCD2Q9UBJ2 740 aa14.48□□□□□ -0.09
USP39-205ENST00000442708 ERRFI1Q9UJM3 462 aaPredicted RBP14.48□□□□□ -0.09
USP39-205ENST00000442708 IFT52Q9Y366 437 aa14.48□□□□□ -0.09
USP39-205ENST00000442708 PHF3Q92576 2039 aaKnown RBP14.48□□□□□ -0.09
USP39-205ENST00000442708 NAV2Q8IVL1 2488 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 H0YC42 278 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 M0QX08 132 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 ETV2O00321 342 aaPredicted RBP14.47□□□□□ -0.09
USP39-205ENST00000442708 PRRG2O14669 202 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 FRS3O43559 492 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 RNF224P0DH78 156 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 ACAA2P42765 397 aaKnown RBP14.47□□□□□ -0.09
USP39-205ENST00000442708 TPD52P55327 224 aaPredicted RBP14.47□□□□□ -0.09
USP39-205ENST00000442708 CLDN18P56856 261 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 HOXC5Q00444 222 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 EPS8Q12929 822 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 CBFBQ13951 182 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 LARS2Q15031 903 aaKnown RBP14.47□□□□□ -0.09
USP39-205ENST00000442708 C4orf17Q53FE4 359 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 SLC25A53Q5H9E4 307 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 WLSQ5T9L3 541 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 ZNF585AQ6P3V2 769 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 DHRS4L2Q6PKH6 230 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 ARPINQ7Z6K5 226 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 FJX1Q86VR8 437 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 KRT73Q86Y46 540 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 ULK2Q8IYT8 1036 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 MICU2Q8IYU8 434 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 MARVELD2Q8N4S9 558 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 OR2T12Q8NG77 320 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 GPR32P1Q8NGA4 272 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 ZBTB8AQ96BR9 441 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 TAMM41Q96BW9 452 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 DTNBP1Q96EV8 351 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 NSL1Q96IY1 281 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 PIGQQ9BRB3 760 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 TMEM181Q9P2C4 612 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 PACSIN3Q9UKS6 424 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 ZNF232Q9UNY5 417 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 CAMK2AQ9UQM7 478 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 FAM215AQ9Y5M1 114 aa14.47□□□□□ -0.09
USP39-205ENST00000442708 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 H3BML4 177 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 CCL21O00585 134 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 OPN1LWP04000 364 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 ESRRAP11474 423 aaPredicted RBP14.46□□□□□ -0.09
USP39-205ENST00000442708 CPN1P15169 458 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 ZNF708P17019 499 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 ZNF17P17021 662 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 SHC1P29353 583 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 PRKAR1BP31321 381 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 CPOXP36551 454 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 GSK3BP49841 420 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 SUCLG1P53597 346 aaKnown RBP14.46□□□□□ -0.09
USP39-205ENST00000442708 CLDN20P56880 219 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 SESN3P58005 492 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 KCNC4Q03721 635 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 SRYQ05066 204 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 AAGABQ6PD74 315 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 PLXDC2Q6UX71 529 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 CCDC80Q76M96 950 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 TRPM8Q7Z2W7 1104 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 ARMC8Q8IUR7 673 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 SLC30A8Q8IWU4 369 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 SMYD1Q8NB12 490 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 DMRTA2Q96SC8 542 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 ZNF607Q96SK3 696 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 ACER3Q9NUN7 267 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 ALKBH4Q9NXW9 302 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 MEMO1Q9Y316 297 aa14.46□□□□□ -0.09
USP39-205ENST00000442708 NCOA6Q14686 2063 aaPredicted RBP14.45□□□□□ -0.1
USP39-205ENST00000442708 ELOVL7A1L3X0 281 aa14.45□□□□□ -0.1
USP39-205ENST00000442708 CFAP73A6NFT4 308 aa14.45□□□□□ -0.1
USP39-205ENST00000442708 TMEM229AB2RXF0 380 aa14.45□□□□□ -0.1
USP39-205ENST00000442708 FAM47E-STBD1D6RA91 191 aa14.45□□□□□ -0.1
USP39-205ENST00000442708 UTP20O75691 2785 aaKnown RBP14.45□□□□□ -0.1
USP39-205ENST00000442708 PGCP20142 388 aa14.45□□□□□ -0.1
USP39-205ENST00000442708 POU3F2P20265 443 aaPredicted RBP14.45□□□□□ -0.1
USP39-205ENST00000442708 CD247P20963 164 aa14.45□□□□□ -0.1
USP39-205ENST00000442708 IDH2P48735 452 aaKnown RBP14.45□□□□□ -0.1
USP39-205ENST00000442708 ZNF136P52737 540 aa14.45□□□□□ -0.1
USP39-205ENST00000442708 DLX5P56178 289 aa14.45□□□□□ -0.1
USP39-205ENST00000442708 EEFSECP57772 596 aaKnown RBP14.45□□□□□ -0.1
USP39-205ENST00000442708 VEZF1Q14119 521 aa14.45□□□□□ -0.1
USP39-205ENST00000442708 DUSP7Q16829 419 aa14.45□□□□□ -0.1
USP39-205ENST00000442708 ERICH5Q6P6B1 374 aa14.45□□□□□ -0.1
USP39-205ENST00000442708 RINLQ6ZS11 566 aa14.45□□□□□ -0.1
USP39-205ENST00000442708 SEM1Q6ZVN7 128 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms