RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 CYP7B1O75881 506 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 PGM3O95394 542 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 NTN1O95631 604 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 CLDN1O95832 211 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 IL2RAP01589 272 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 PRKCAP17252 672 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 CCR4P51679 360 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 RPS3AP61247 264 aaKnown RBP13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 CDK6Q00534 326 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 SRYQ05066 204 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 RBBP4Q09028 425 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 LARS2Q15031 903 aaKnown RBP13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 QPRTQ15274 297 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 RNF220Q5VTB9 566 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 REP15Q6BDI9 236 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 SEM1Q6ZVN7 128 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 CHMP1BQ7LBR1 199 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 SNX32Q86XE0 403 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 ZNF440Q8IYI8 595 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 OR8J3Q8NGG0 315 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 OR5M1Q8NGP8 315 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 OR10Q1Q8NGQ4 319 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 OR52P1PQ8NH57 321 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 LILRB4Q8NHJ6 448 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 CA5BP1Q8WTZ4 195 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 WNT2BQ93097 391 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 SLC35B4Q969S0 331 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 LRRC58Q96CX6 371 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 RNF145Q96MT1 663 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 TRIB1Q96RU8 372 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 TM9SF2Q99805 663 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 KLHDC3Q9BQ90 382 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 CCDC106Q9BWC9 280 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 GID8Q9NWU2 228 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 PAQR5Q9NXK6 330 aaPredicted RBP13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 CLCF1Q9UBD9 225 aa13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 PLEKHB1Q9UF11 243 aaPredicted RBP13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 USP9YO00507 2555 aaPredicted RBP13.56□□□□□ -0.24
CSNK1E-210ENST00000442216 LOC100653049A0A140TA62 436 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 CDHR4A6H8M9 788 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 CLCA1A8K7I4 914 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 MRASO14807 208 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 KRT34O76011 436 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 GP1BBP13224 206 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 ME2P23368 584 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 SLC6A2P23975 617 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 RNF144AP50876 292 aaPredicted RBP13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 SUCLG1P53597 346 aaKnown RBP13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 CLDN15P56746 228 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 PLAURQ03405 335 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 FOXF1Q12946 379 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 TOMM34Q15785 309 aaPredicted RBP13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 ADRM1Q16186 407 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 PDSS1Q5T2R2 415 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 MRPL2Q5T653 305 aaKnown RBP13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 NANOGP8Q6NSW7 305 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 ESPNLQ6ZVH7 1005 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 NET1Q7Z628 596 aaPredicted RBP13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 PIGWQ7Z7B1 504 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 SERPINA11Q86U17 422 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 MTDHQ86UE4 582 aaKnown RBP13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 GGNQ86UU5 652 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 SLC30A8Q8IWU4 369 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 C10orf111Q8N326 155 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 FBXO27Q8NI29 283 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 MAL2Q969L2 176 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 NPAS1Q99742 590 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 SPATA5L1Q9BVQ7 753 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 SPATA9Q9BWV2 254 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 FAM107BQ9H098 131 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 MYLK2Q9H1R3 596 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 KAT8Q9H7Z6 458 aaKnown RBP13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 NANOGQ9H9S0 305 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 ACER3Q9NUN7 267 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 DNAJB12Q9NXW2 375 aaKnown RBP13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 ARMCX1Q9P291 453 aa13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 ZNF443Q9Y2A4 671 aaPredicted RBP13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 SPTAN1Q13813 2472 aaKnown RBP13.55□□□□□ -0.24
CSNK1E-210ENST00000442216 A0A0G2JNJ9 132 aa13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 CLDN24A6NM45 220 aa13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 GJE1A6NN92 205 aa13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 SHISA8B8ZZ34 492 aa13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 FXYD1O00168 92 aa13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 ADAMDEC1O15204 470 aa13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 TOXO94900 526 aa13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 RCBTB2O95199 551 aa13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 PABPC4LP0CB38 370 aaKnown RBP13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 UQCRBP14927 111 aa13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 FKBP2P26885 142 aaKnown RBP13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 CLDN20P56880 219 aa13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 SESN3P58005 492 aa13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 MTPNP58546 118 aa13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 EEF1A1P68104 462 aaKnown RBP13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 SELENBP1Q13228 472 aa13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 SCARB2Q14108 478 aa13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 RPS26P11Q5JNZ5 115 aaPredicted RBP13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 EEF1A1P5Q5VTE0 462 aa13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 ZNF836Q6ZNA1 936 aa13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 HMGN2P46Q86SG4 172 aa13.54□□□□□ -0.24
CSNK1E-210ENST00000442216 VRK2Q86Y07 508 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms