RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 PSMB1P20618 241 aaKnown RBP12.43□□□□□ -0.42
ACTN1-204ENST00000438964 GSTM3P21266 225 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 PTBP1P26599 531 aaKnown RBP eCLIP12.43□□□□□ -0.421e-7■■■■■ 30.8
ACTN1-204ENST00000438964 BSGP35613 385 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 RPL3P39023 403 aaKnown RBP12.43□□□□□ -0.42
ACTN1-204ENST00000438964 PNLIPRP1P54315 467 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 H2BFSP57053 126 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 FKBP1BP68106 108 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 ZNF169Q14929 603 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-204ENST00000438964 HSD17B12Q53GQ0 312 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 C9orf64Q5T6V5 341 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 YOD1Q5VVQ6 348 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-204ENST00000438964 GDPD4Q6W3E5 623 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 FAM83HQ6ZRV2 1179 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-204ENST00000438964 TMUB2Q71RG4 321 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 FCRLAQ7L513 359 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 FGD2Q7Z6J4 655 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 DNAAF1Q8NEP3 725 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 OR9A1PQ8NGU1 263 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 OR1S1Q8NH92 325 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 LILRB1Q8NHL6 650 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-204ENST00000438964 OTUB2Q96DC9 234 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 ZMYND19Q96E35 227 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-204ENST00000438964 MICU1Q9BPX6 476 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 VN1R3Q9BXE9 311 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 XKR8Q9H6D3 395 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 USP36Q9P275 1121 aaKnown RBP12.43□□□□□ -0.42
ACTN1-204ENST00000438964 LRFN2Q9ULH4 789 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 MOKQ9UQ07 419 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 ATG12O94817 140 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 IL9P15248 144 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 GABRR2P28476 465 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 MC3RP41968 323 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 SSR2P43308 183 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 PLA2G7Q13093 441 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 KCNAB1Q14722 419 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 TRAM2Q15035 370 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 IGSF11Q5DX21 431 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 C9orf131Q5VYM1 1079 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 C11orf88Q6PI97 169 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 ZNF620Q6ZNG0 422 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 HDDC2Q7Z4H3 204 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 ZDHHC1Q8WTX9 485 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 AMDHD1Q96NU7 426 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 CASD1Q96PB1 797 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 SLC38A3Q99624 504 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 NDC1Q9BTX1 674 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 IFT27Q9BW83 186 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 OR52D1Q9H346 318 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 LDAHQ9H6V9 325 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 ISYNA1Q9NPH2 558 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 TMEM138Q9NPI0 162 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 SNRNP200O75643 2136 aaKnown RBP12.42□□□□□ -0.42
ACTN1-204ENST00000438964 FAM171A2A8MVW0 826 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 GOSR2O14653 212 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 RP2O75695 350 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 ZIC2O95409 532 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-204ENST00000438964 EOMESO95936 686 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 CTSAP10619 480 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 EPXP11678 715 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 PCBP4P57723 403 aaKnown RBP12.42□□□□□ -0.42
ACTN1-204ENST00000438964 LGALS3BPQ08380 585 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 OR7E24Q6IFN5 339 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 NIPAL3Q6P499 406 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 GDF7Q7Z4P5 450 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 OR13C2Q8NGS9 318 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 OR2A12Q8NGT7 310 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 ING5Q8WYH8 240 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 ATOH1Q92858 354 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-204ENST00000438964 MRPS24Q96EL2 167 aaKnown RBP12.42□□□□□ -0.42
ACTN1-204ENST00000438964 NEUROD4Q9HD90 331 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 KLHL42Q9P2K6 505 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 KIF25Q9UIL4 384 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 KCNJ13O60928 360 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 SDC3O75056 442 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 CLTBP09497 229 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 ELFN1P0C7U0 828 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 NDUFV2P19404 249 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 TEAD1P28347 426 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 S100A11P31949 105 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 TCTN1Q2MV58 587 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 DEFB115Q30KQ5 88 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 GXYLT1Q4G148 440 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 PRPF38BQ5VTL8 546 aaKnown RBP12.42□□□□□ -0.42
ACTN1-204ENST00000438964 OTPQ5XKR4 325 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 CD300LDQ6UXZ3 194 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 PCSK9Q8NBP7 692 aaKnown RBP12.42□□□□□ -0.42
ACTN1-204ENST00000438964 OR8K3Q8NH51 312 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 DIO2Q92813 273 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 SYNPO2LQ9H987 977 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 SLC6A20Q9NP91 592 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 PRKAG2Q9UGJ0 569 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 ZNF346Q9UL40 294 aaKnown RBP12.42□□□□□ -0.42
ACTN1-204ENST00000438964 ACSL5Q9ULC5 683 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 STON1Q9Y6Q2 735 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 GON4LQ3T8J9 2241 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 DOCK9Q9BZ29 2069 aa12.42□□□□□ -0.42
ACTN1-204ENST00000438964 IRGMA1A4Y4 181 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 A8MXK9 166 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 PYCARD-AS1I3L0S3 204 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms