RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 PAQR5Q9NXK6 330 aaPredicted RBP12.66□□□□□ -0.38
SMARCE1-205ENST00000431889 KLHL13Q9P2N7 655 aa12.66□□□□□ -0.38
SMARCE1-205ENST00000431889 KCNE5Q9UJ90 142 aa12.66□□□□□ -0.38
SMARCE1-205ENST00000431889 MID2Q9UJV3 735 aa12.66□□□□□ -0.38
SMARCE1-205ENST00000431889 MKLN1Q9UL63 735 aa12.66□□□□□ -0.38
SMARCE1-205ENST00000431889 GPR52Q9Y2T5 361 aa12.66□□□□□ -0.38
SMARCE1-205ENST00000431889 MAGED1Q9Y5V3 778 aaPredicted RBP12.66□□□□□ -0.38
SMARCE1-205ENST00000431889 ITM2AO43736 263 aa12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 RAMP1O60894 148 aa12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 H6PDO95479 791 aa12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 PSMB1P20618 241 aaKnown RBP12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 ATP12AP54707 1039 aa12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 VEZF1Q14119 521 aa12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 MLC1Q15049 377 aa12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 SFRP5Q5T4F7 317 aa12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 OR4F3Q6IEY1 312 aa12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 PRSS57Q6UWY2 283 aa12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 ZNF527Q8NB42 609 aa12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 HTRA1Q92743 480 aa12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 MTERF3Q96E29 417 aa12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 SDF2Q99470 211 aa12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 TMEM204Q9BSN7 226 aa12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 CXorf56Q9H5V9 222 aa12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 EML4Q9HC35 981 aaKnown RBP12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 GLRX2Q9NS18 164 aa12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 ING1Q9UK53 422 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 DTNAQ9Y4J8 743 aa12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 JMJD1CQ15652 2540 aa12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 FBN1P35555 2871 aaKnown RBP12.65□□□□□ -0.38
SMARCE1-205ENST00000431889 CR1P17927 2039 aa12.65□□□□□ -0.39
SMARCE1-205ENST00000431889 A0A1W2PR80 420 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 ESPNB1AK53 854 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 PRKD3O94806 890 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 UBTFL6P0CB48 400 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 UBL4AP11441 157 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 PPP3CBP16298 524 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 CCNA2P20248 432 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 MATN1P21941 496 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 SLC7A1P30825 629 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 EIF1P41567 113 aaKnown RBP12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 VSNL1P62760 191 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 BSPH1Q075Z2 132 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 GTF2IRD2BQ6EKJ0 949 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 RNF165Q6ZSG1 346 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 GTF2IRD2Q86UP8 949 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 ZNF611Q8N823 705 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 OR56A1Q8NGH5 318 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 RAB8BQ92930 207 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 KISS1RQ969F8 398 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 CPNE4Q96A23 557 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 DUSP26Q9BV47 211 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 GDF2Q9UK05 429 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 RNF115Q9Y4L5 304 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 DPRXA6NFQ7 191 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 FAM171A2A8MVW0 826 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 H3BNH8 94 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 SMAD9O15198 467 aaKnown RBP12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 ZNF264O43296 627 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 CPSF4O95639 269 aaKnown RBP12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 YES1P07947 543 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 MAPK1P28482 360 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 ACVR1BP36896 505 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 PPP2R2BQ00005 443 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 IFFO1Q0D2I5 559 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 RNPS1Q15287 305 aaKnown RBP12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 MAPK14Q16539 360 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 CLEC12BQ2HXU8 276 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 TIGD2Q4W5G0 525 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 C6orf120Q7Z4R8 191 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 MTERF4Q7Z6M4 381 aaKnown RBP12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 STEAP2Q8NFT2 490 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 GTPBP3Q969Y2 492 aaKnown RBP12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 COQ8BQ96D53 544 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 PSD2Q9BQI7 771 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 TIGARQ9NQ88 270 aa12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 ZNF701Q9NV72 531 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 GPC6Q9Y625 555 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 V9GYY5 206 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-205ENST00000431889 RNF103-CHMP3A0A140T963 221 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 CLDN24A6NM45 220 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 NPIPB9F8W1W9 429 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 BPGMP07738 259 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 CD3EP07766 207 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 RYKP34925 604 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 NME5P56597 212 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 C21orf58P58505 322 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 RPS4XP62701 263 aaKnown RBP12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 KRTAP1-1Q07627 177 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 RASGEF1BQ0VAM2 473 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 MERTKQ12866 999 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 LSM12Q3MHD2 195 aaKnown RBP12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 NCMAPQ5T1S8 102 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 TNFAIP8L2Q6P589 184 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 BHLHA15Q7RTS1 189 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 RIMKLAQ8IXN7 391 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 ZNF781Q8N8C0 355 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 TOR1AIP2Q8NFQ8 470 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 OR4A15Q8NGL6 344 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 OR5W2Q8NH69 310 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms