RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 POC1BQ8TC44 478 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 CCDC3Q9BQI4 270 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 LRFN3Q9BTN0 628 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 C1QTNF3Q9BXJ4 246 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 SLCO1B1Q9Y6L6 691 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 POLEQ07864 2286 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 TRAV19A0A0A6YYK7 116 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 MEIS3P1A6NDR6 274 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 PI15O43692 258 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 ENGP17813 658 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 PRSS3P35030 304 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 EVX1P49640 407 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 SNRPD2P62316 118 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 ILKQ13418 452 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 OR10Q1Q8NGQ4 319 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 GNPDA2Q8TDQ7 276 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 MAGEH1Q9H213 219 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 NMUR1Q9HB89 426 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 AUP1Q9Y679 476 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 CADP27708 2225 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 ELFN1P0C7U0 828 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 CPT2P23786 658 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 KDELR2P33947 212 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 ARR3P36575 388 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 P2RX2Q9UBL9 471 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 TMEM184BQ9Y519 407 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 PLXND1Q9Y4D7 1925 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 ONECUT3O60422 494 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 STBD1O95210 358 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 SLC16A8O95907 504 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 ACP2P11117 423 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 GIFP27352 417 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 CD52P31358 61 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 MAP2K6P52564 334 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 ST3GAL3Q11203 375 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 MAP4K2Q12851 820 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 UBE3DQ7Z6J8 389 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 AMBNQ9NP70 447 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 RPH3AQ9Y2J0 694 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 PCDHGA5Q9Y5G8 931 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 ENPP4Q9Y6X5 453 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 IQCF5A8MTL0 148 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 A8MV72 311 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 H7BY64 318 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 ATP1B1P05026 303 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 PREPP48147 710 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 TAS2R60P59551 318 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 RAP1AP62834 184 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 MRPL41Q8IXM3 137 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 CREB3L4Q8TEY5 395 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 BEX2Q9BXY8 128 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 CORINQ9Y5Q5 1042 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 STC1P52823 247 aa7.09□□□□□ -1.28
SYNPO2-202ENST00000429713 RAET1GQ6H3X3 334 aa7.09□□□□□ -1.28
SYNPO2-202ENST00000429713 PDE12Q6L8Q7 609 aaKnown RBP7.09□□□□□ -1.28
SYNPO2-202ENST00000429713 MICU1Q9BPX6 476 aa7.09□□□□□ -1.28
SYNPO2-202ENST00000429713 PCDHGC4Q9Y5F7 938 aa7.09□□□□□ -1.28
SYNPO2-202ENST00000429713 MFSD2BA6NFX1 497 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 ZNF736B4DX44 427 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 SLC16A5O15375 505 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 HLA-DQA2P01906 255 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 GNSP15586 552 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 ATP5A1P25705 553 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 ALG11Q2TAA5 492 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 ADGRF1Q5T601 910 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 SLC16A12Q6ZSM3 486 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 UBAC2Q8NBM4 344 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 ARRDC4Q8NCT1 418 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 OR4K17Q8NGC6 315 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 OR13C4Q8NGS5 318 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 MR1Q95460 341 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 ESAMQ96AP7 390 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 ZNF514Q96K75 400 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 POLDIP3Q9BY77 421 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 GALPQ9UBC7 116 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 TRPM7Q96QT4 1865 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 GLTPD2A6NH11 291 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 A8MXK9 166 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 BLOC1S5-TXNDC5H3BN57 136 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 NUPL2O15504 423 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 ALDOBP05062 364 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 RPLP1P05386 114 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 RPL10P27635 214 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 TLX1P31314 330 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 NOVP48745 357 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 TAS2R46P59540 309 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 C1QTNF8P60827 252 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 TPBGQ13641 420 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 FAM83HQ6ZRV2 1179 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 MAMDC2Q7Z304 686 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 CELF2-AS1Q8N7Q2 184 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 TSTD1Q8NFU3 115 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 OR6T1Q8NGN1 323 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 SLC30A3Q99726 388 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 ACTL8Q9H568 366 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 TXNL4BQ9NX01 149 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 PTGDR2Q9Y5Y4 395 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 KLRG2A4D1S0 409 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 MT-CO2P00403 227 aa7.08□□□□□ -1.28
SYNPO2-202ENST00000429713 GXYLT1Q4G148 440 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms