RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 FGF20Q9NP95 211 aaPredicted RBP11.59□□□□□ -0.55
CDH3-202ENST00000429102 ADAM18Q9Y3Q7 739 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 FMO6PO60774 539 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 KHDRBS3O75525 346 aaKnown RBP11.59□□□□□ -0.55
CDH3-202ENST00000429102 ZGLP1P0C6A0 271 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 POLR2CP19387 275 aaPredicted RBP11.59□□□□□ -0.55
CDH3-202ENST00000429102 GABRA3P34903 492 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 CENPAP49450 140 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 TSPAN5P62079 268 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 ANGPT1Q15389 498 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 ZNF77Q15935 545 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 DEFB110Q30KQ9 67 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 LILRA6Q6PI73 481 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 OAFQ86UD1 273 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 CDK20Q8IZL9 346 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 DNAAF1Q8NEP3 725 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 HSD17B8Q92506 261 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 PTP4A1Q93096 173 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 WDR34Q96EX3 536 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 MICU1Q9BPX6 476 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 POLMQ9NP87 494 aaPredicted RBP11.59□□□□□ -0.55
CDH3-202ENST00000429102 SLC6A20Q9NP91 592 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 ACSS1Q9NUB1 689 aaPredicted RBP11.59□□□□□ -0.55
CDH3-202ENST00000429102 KLHL21Q9UJP4 597 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 A0A0A6YYD5 115 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 FAM86C2PA6NEL3 165 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 SLC43A1O75387 559 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 ALDOBP05062 364 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 VEGFCP49767 419 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 RAB28P51157 221 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 REEP5Q00765 189 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 NOGQ13253 232 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 METRNLQ641Q3 311 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 ZNF613Q6PF04 617 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 ZNF836Q6ZNA1 936 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 COMMD7Q86VX2 200 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 TCTE3Q8IZS6 198 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 C9orf62Q8N4C0 152 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 ARIH2OSQ8N7S6 290 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 DNAJA4Q8WW22 397 aaPredicted RBP11.59□□□□□ -0.55
CDH3-202ENST00000429102 SMPDL3BQ92485 455 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 CHFRQ96EP1 664 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 FUZQ9BT04 418 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 KLK11Q9UBX7 282 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 ACAD8Q9UKU7 415 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 LIPT1Q9Y234 373 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 EML2O95834 649 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 WNT1P04628 370 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 APEHP13798 732 aaKnown RBP11.58□□□□□ -0.56
CDH3-202ENST00000429102 ATF1P18846 271 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 RAB3BP20337 219 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 HTR1FP30939 366 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 ST3GAL2Q16842 350 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 DEFB115Q30KQ5 88 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 METAP1DQ6UB28 335 aaPredicted RBP11.58□□□□□ -0.56
CDH3-202ENST00000429102 ZAR1Q86SH2 424 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 HCAR2Q8TDS4 363 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 PATE1Q8WXA2 126 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 TSACCQ96A04 125 aaPredicted RBP11.58□□□□□ -0.56
CDH3-202ENST00000429102 TSSK2Q96PF2 358 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 DDOQ99489 341 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 TEAD3Q99594 435 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 GDF15Q99988 308 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 PRDM7Q9NQW5 492 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 GLTPQ9NZD2 209 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 ZNF69Q9UC07 566 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 ZNF443Q9Y2A4 671 aaPredicted RBP11.58□□□□□ -0.56
CDH3-202ENST00000429102 H0YC42 278 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 GMDSO60547 372 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 MT-ND5P03915 603 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 RLN1P04808 185 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 H2AFB2P0C5Z0 115 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 ANXA3P12429 323 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 AHCYP23526 432 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 EDNRAP25101 427 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 OR1Q1Q15612 314 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 NRSN1Q8IZ57 195 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 METTL27Q8N6F8 245 aaPredicted RBP11.58□□□□□ -0.56
CDH3-202ENST00000429102 OR5M3Q8NGP4 307 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 COQ8AQ8NI60 647 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 TMEM239Q8WW34 195 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 BPIFA2Q96DR5 249 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 ASB4Q9Y574 426 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 PLXNB3Q9ULL4 1909 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 GXYLT2A0PJZ3 443 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 RIIAD1A6NNX1 92 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 SLC22A5O76082 557 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 OR7A10O76100 309 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 EFEMP2O95967 443 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 ADH1CP00326 375 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 ADH7P40394 386 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 FOXK2Q01167 660 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 STX4Q12846 297 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 ERV3-1Q14264 604 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 FRRS1Q6ZNA5 592 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 MEPCEQ7L2J0 689 aaKnown RBP11.58□□□□□ -0.56
CDH3-202ENST00000429102 OR56A1Q8NGH5 318 aa11.58□□□□□ -0.56
CDH3-202ENST00000429102 TRBV2A0A0J9YWF9 115 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 A0A1B0GTH9 108 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 KDM4EB2RXH2 506 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms