RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 RDH14Q9HBH5 336 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 MRPL40Q9NQ50 206 aaKnown RBP3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 FAM120CQ9NX05 1096 aaKnown RBP3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 PTBP2Q9UKA9 531 aaKnown RBP3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 VANGL2Q9ULK5 521 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 CHMP2BQ9UQN3 213 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 AKAP9Q99996 3911 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 DOCK4Q8N1I0 1966 aa3.96□□□□□ -1.77
HMGB3P5-201ENST00000428894 FER1L5A0AVI2 2057 aa3.96□□□□□ -1.77
HMGB3P5-201ENST00000428894 MDC1Q14676 2089 aaKnown RBP3.96□□□□□ -1.77
HMGB3P5-201ENST00000428894 NF1P21359 2839 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 LRP4O75096 1905 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 TRAV6A0A075B6T7 132 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 IGHV3OR16-10A0A075B7F0 116 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 A0A1W2PQ09 198 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 ILVBLA1L0T0 632 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 SYCE1LA8MT33 242 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 MPTX1A8MV57 137 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 K7EM74 188 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 K7ERQ8 282 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 UBXN8O00124 270 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 KMOO15229 486 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 SNAP91O60641 907 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 GLRA3O75311 464 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 CDK2AP2O75956 126 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 STK17BO94768 372 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 MBD3O95983 291 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 BCL10O95999 233 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 IGLV3-25P01717 112 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 KRT6AP02538 564 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 MT-ND3P03897 115 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 KRT6BP04259 564 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 HOXC4P09017 264 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 JAK1P23458 1154 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 CD1CP29017 333 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 OR1E1P30953 314 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 DLSTP36957 453 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 CD86P42081 329 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 RAD52P43351 418 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 RPL34P49207 117 aaKnown RBP3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 SERPINH1P50454 418 aaKnown RBP3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 VBP1P61758 197 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 CSNK2BP67870 215 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 CYCSP99999 105 aaKnown RBP3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 ZNF415Q09FC8 603 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 ELP6Q0PNE2 266 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 CALCOCO2Q13137 446 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 EIF4EBP2Q13542 120 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 CUL2Q13617 745 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 TPD52L1Q16890 204 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 NADK2Q4G0N4 442 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 C1orf220Q5T0J3 134 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 AADACL4Q5VUY2 407 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 SYPL2Q5VXT5 272 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 SPECC1LQ69YQ0 1117 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 CYB5D1Q6P9G0 228 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 SHQ1Q6PI26 577 aaKnown RBP3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 C11orf88Q6PI97 169 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 BZW1Q7L1Q6 419 aaKnown RBP3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 TAC4Q86UU9 113 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 NUDT13Q86X67 352 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 ZGRF1Q86YA3 2104 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 ST13P4Q8IZP2 240 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 Q8NBF4 154 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 ZNF540Q8NDQ6 660 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 OR56A4Q8NGH8 313 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 OR10G6Q8NH81 332 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 OR1L3Q8NH93 324 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 EXD1Q8NHP7 514 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 GOT1L1Q8NHS2 421 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 PDCD6IPQ8WUM4 868 aaKnown RBP3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 RASL10AQ92737 203 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 EEF2KMTQ96G04 330 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 ANKRD27Q96NW4 1050 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 PSMB7Q99436 277 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 CCDC77Q9BR77 488 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 SIKE1Q9BRV8 207 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 CCDC106Q9BWC9 280 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 RAB11FIP5Q9BXF6 653 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 GSDMCQ9BYG8 508 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 KLHL4Q9C0H6 718 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 VCXQ9H320 206 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 ZDHHC6Q9H6R6 413 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 C12orf10Q9HB07 376 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 C12orf4Q9NQ89 552 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 SDHAF3Q9NRP4 125 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 FAM207AQ9NSI2 230 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 ANO10Q9NW15 660 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 HPF1Q9NWY4 346 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 NDUFA13Q9P0J0 144 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 VPS18Q9P253 973 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 CLEC4AQ9UMR7 237 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 STUB1Q9UNE7 303 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 C15orf41Q9Y2V0 281 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 CBY1Q9Y3M2 126 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 FAM169AQ9Y6X4 670 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 ABCA2Q9BZC7 2435 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 TACC2O95359 2948 aa3.96□□□□□ -1.78
HMGB3P5-201ENST00000428894 POLEQ07864 2286 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms