RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 CLK3P49761 638 aaKnown RBP8.1□□□□□ -1.11
SMC6-204ENST00000428868 SSR4P51571 173 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 ADARB1P78563 741 aaKnown RBP8.1□□□□□ -1.11
SMC6-204ENST00000428868 DGCR6Q14129 220 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 TRAM2Q15035 370 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 ZNF550Q7Z398 422 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 NUP54Q7Z3B4 507 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 PRICKLE2Q7Z3G6 844 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 MDGA2Q7Z553 956 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 ZER1Q7Z7L7 766 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 CHERPQ8IWX8 916 aaKnown RBP8.1□□□□□ -1.11
SMC6-204ENST00000428868 ATG16L2Q8NAA4 619 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 ZNF527Q8NB42 609 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 AQP11Q8NBQ7 271 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 OR4K5Q8NGD3 323 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 PFN4Q8NHR9 129 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 DUSP19Q8WTR2 217 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 CYGBQ8WWM9 190 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 ASB15Q8WXK1 588 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 KIAA1143Q96AT1 154 aaPredicted RBP8.1□□□□□ -1.11
SMC6-204ENST00000428868 C3orf49Q96BT1 292 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 SDCCAG3Q96C92 435 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 FAM46AQ96IP4 442 aaKnown RBP8.1□□□□□ -1.11
SMC6-204ENST00000428868 RBM4BQ9BQ04 359 aaKnown RBP8.1□□□□□ -1.11
SMC6-204ENST00000428868 PSD2Q9BQI7 771 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 ADI1Q9BV57 179 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 RBM4Q9BWF3 364 aaKnown RBP8.1□□□□□ -1.11
SMC6-204ENST00000428868 LAT2Q9GZY6 243 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 DSN1Q9H410 356 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 SH2D2AQ9NP31 389 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 EXOSC3Q9NQT5 275 aaKnown RBP8.1□□□□□ -1.11
SMC6-204ENST00000428868 C20orf141Q9NUB4 165 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 SMPD3Q9NY59 655 aaPredicted RBP8.1□□□□□ -1.11
SMC6-204ENST00000428868 UBAP1Q9NZ09 502 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 MED11Q9P086 117 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 KIF17Q9P2E2 1029 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 ICAM5Q9UMF0 924 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 YARS2Q9Y2Z4 477 aaKnown RBP8.1□□□□□ -1.11
SMC6-204ENST00000428868 IGKV1D-42A0A075B6H8 117 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 SHISA8B8ZZ34 492 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 E9PQ18 207 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 H0YJX3 145 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 KPNA4O00629 521 aaPredicted RBP8.09□□□□□ -1.11
SMC6-204ENST00000428868 OR10H3O60404 316 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 CDC40O60508 579 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMC6-204ENST00000428868 ACADSP16219 412 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 NAGAP17050 411 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 TCEA1P23193 301 aaKnown RBP8.09□□□□□ -1.11
SMC6-204ENST00000428868 ITGA3P26006 1051 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 CASP3P42574 277 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 GPR4P46093 362 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 OMPP47874 163 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 GSSP48637 474 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 IDH2P48735 452 aaKnown RBP8.09□□□□□ -1.11
SMC6-204ENST00000428868 PSPHP78330 225 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 FOXK1P85037 733 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 ST3GAL3Q11203 375 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 MERTKQ12866 999 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 COL28A1Q2UY09 1125 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 SLC36A3Q495N2 470 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 ACER2Q5QJU3 275 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 ZNF613Q6PF04 617 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 KLHL17Q6TDP4 642 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 KIF18BQ86Y91 864 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 NRMQ8IXM6 262 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 SLC15A4Q8N697 577 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 RNF217Q8TC41 542 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 SLC39A7Q92504 469 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 TTC9Q92623 222 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 TFAP2CQ92754 450 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 RELTQ969Z4 430 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 NTNG2Q96CW9 530 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 TMCO6Q96DC7 493 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 CNBD2Q96M20 576 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 OSBPL11Q9BXB4 747 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 HES7Q9BYE0 225 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 TRIM2Q9C040 744 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 VCXQ9H320 206 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 RIBC2Q9H4K1 309 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 ARMC7Q9H6L4 198 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 METTL7AQ9H8H3 244 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 TMEM27Q9HBJ8 222 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 ATP13A2Q9NQ11 1180 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 MEPEQ9NQ76 525 aaPredicted RBP8.09□□□□□ -1.11
SMC6-204ENST00000428868 KRT84Q9NSB2 600 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 KLRF1Q9NZS2 232 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 CNIH4Q9P003 139 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 REV1Q9UBZ9 1251 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 AASSQ9UDR5 926 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 TMCC3Q9ULS5 477 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 RAB26Q9ULW5 256 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 WIF1Q9Y5W5 379 aa8.09□□□□□ -1.11
SMC6-204ENST00000428868 USP24Q9UPU5 2620 aa8.08□□□□□ -1.12
SMC6-204ENST00000428868 LAMA5O15230 3695 aa8.08□□□□□ -1.12
SMC6-204ENST00000428868 ARRDC5A6NEK1 342 aa8.08□□□□□ -1.12
SMC6-204ENST00000428868 A6NL46 340 aa8.08□□□□□ -1.12
SMC6-204ENST00000428868 EIF4E1BA6NMX2 242 aaKnown RBP8.08□□□□□ -1.12
SMC6-204ENST00000428868 LRRN3E7EW58 273 aa8.08□□□□□ -1.12
SMC6-204ENST00000428868 M0R129 80 aa8.08□□□□□ -1.12
SMC6-204ENST00000428868 CDC42EP2O14613 210 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms